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PLM1_100_b1_sep16_scaffold_8152

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_8152_1
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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1..1833
DNA (1833bp) protein (611aa)
ATP-dependent DNA helicase PcrA Tax=Thermincola potens (strain JR) RepID=D5XD67_THEPJ
ATP-dependent DNA helicase PcrA
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM1_100_b1_sep16_scaffold_8152_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1873..2160
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
aspartyl/glutamyl-tRNA amidotransferase subunit C bin=GWC2_Nitrospirae-rel_56_14 species=Lentibacillus jeotgali genus=Lentibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PLM1_100_b1_sep16_scaffold_8152_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2108..3418
DNA (1311bp) protein (437aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NF15_DESAR
PLM1_100_b1_sep16_scaffold_8152_4
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3415..4350
DNA (936bp) protein (312aa)
Endonuclease Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USM2_PSEUP
endonuclease
Endonuclease {ECO:0000313|EMBL:AER57273.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
PLM1_100_b1_sep16_scaffold_8152_5
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

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4370..5053
DNA (684bp) protein (228aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain bin=GWC2_Chloroflexi_49_37 species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
two component LuxR family transcriptional regulator
Tax=RBG_16_Chloroflexi_47_49_curated
PLM1_100_b1_sep16_scaffold_8152_6
unknown

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5016..5276
DNA (261bp) protein (87aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_8152_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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5408..5650
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX06253.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM1_100_b1_sep16_scaffold_8152_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5805..6551)
DNA (747bp) protein (249aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] bin=bin1_lowGC species=Halomonas anticariensis genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
glutamine synthetase, type I
PLM1_100_b1_sep16_scaffold_8152_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6530..7117)
DNA (588bp) protein (196aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Glutamine synthetase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADT4_THEID
glutamine synthetase, type I
PLM1_100_b1_sep16_scaffold_8152_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7136..7474)
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93915.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Nitrogen regulatory protein P-II bin=GWC2_Nitrospirae_57_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
nitrogen regulatory protein P-II
PLM1_100_b1_sep16_scaffold_8152_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7758..8663)
DNA (906bp) protein (302aa)
Ammonium transporter bin=GWD2_Deltaproteobacteria_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ammonium transporter
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 11 items

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