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PLM1_100_b1_sep16_scaffold_1870

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1870_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..244)
DNA (243bp) protein (81aa)
DNA-directed RNA polymerase subunit alpha Tax=Thermincola potens (strain JR) RepID=D5XAB1_THEPJ
Uncharacterized protein {ECO:0000313|EMBL:ETX01750.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
DNA-directed RNA polymerase subunit alpha
PLM1_100_b1_sep16_scaffold_1870_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(211..522)
DNA (312bp) protein (104aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpoA; DNA-directed RNA polymerase subunit alpha
Tax=RBG_16_Acidobacteria_68_9_curated
PLM1_100_b1_sep16_scaffold_1870_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(625..1251)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 Tax=Geopsychrobacter electrodiphilus RepID=UPI00038067F6
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
rpsD; 30S ribosomal protein S4
PLM1_100_b1_sep16_scaffold_1870_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1295..1690)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8L7_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
30S ribosomal protein S11
PLM1_100_b1_sep16_scaffold_1870_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1700..2071)
DNA (372bp) protein (124aa)
30S ribosomal protein S13 Tax=Dehalobacter sp. FTH1 RepID=UPI0003628697
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rpsM; SSU ribosomal protein S13p (S18e)
PLM1_100_b1_sep16_scaffold_1870_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..2476)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Paenibacillus RepID=F8FA23_PAEMK
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
translation initiation factor IF-1
PLM1_100_b1_sep16_scaffold_1870_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2497..3246)
DNA (750bp) protein (250aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Methionine aminopeptidase Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W406_DESAS
methionine aminopeptidase
PLM1_100_b1_sep16_scaffold_1870_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3253..3810)
DNA (558bp) protein (186aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
adenylate kinase (EC:2.7.4.3)
Adenylate kinase Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKR1_DESB2
PLM1_100_b1_sep16_scaffold_1870_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3937..5124)
DNA (1188bp) protein (396aa)
Protein translocase subunit SecY Tax=Desulfococcus multivorans DSM 2059 RepID=S7T9D4_DESML
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
secY; preprotein translocase subunit SecY
PLM1_100_b1_sep16_scaffold_1870_10
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5121..5570)
DNA (450bp) protein (150aa)
50S ribosomal protein L15 Tax=Pelobacter propionicus (strain DSM 2379) RepID=RL15_PELPD
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM1_100_b1_sep16_scaffold_1870_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5601..5786)
DNA (186bp) protein (62aa)
50S ribosomal protein L30 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=RL30_DESAA
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
rpmD; 50S ribosomal protein L30
PLM1_100_b1_sep16_scaffold_1870_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5796..6296)
DNA (501bp) protein (167aa)
30S ribosomal protein S5 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKR5_DESB2
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
30S ribosomal protein S5
PLM1_100_b1_sep16_scaffold_1870_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6335..6703)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=RL18_HELMI
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rplR; 50S ribosomal protein L18
PLM1_100_b1_sep16_scaffold_1870_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6709..7239)
DNA (531bp) protein (177aa)
50S ribosomal protein L6 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2SUP9_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rplF; 50S ribosomal protein L6
PLM1_100_b1_sep16_scaffold_1870_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7261..7659)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
30S ribosomal protein S8
PLM1_100_b1_sep16_scaffold_1870_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7907..8455)
DNA (549bp) protein (183aa)
50S ribosomal protein L5 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8H8_AMMDK
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
50S ribosomal protein L5
PLM1_100_b1_sep16_scaffold_1870_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8492..8839)
DNA (348bp) protein (116aa)
50S ribosomal protein L24 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8H9_AMMDK
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
50S ribosomal protein L24
PLM1_100_b1_sep16_scaffold_1870_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8876..9244)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Roseovarius RepID=A3VZA7_9RHOB
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rplN; 50S ribosomal protein L14
PLM1_100_b1_sep16_scaffold_1870_19
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9241..9540)
DNA (300bp) protein (100aa)
30S ribosomal protein S17 Tax=Thermoanaerobacterium RepID=F6BGP2_THEXL
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
30S ribosomal protein S17
PLM1_100_b1_sep16_scaffold_1870_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9561..9761)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 Tax=Geobacillus sp. JF8 RepID=S5ZJT3_9BACI
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
50S ribosomal protein L29
PLM1_100_b1_sep16_scaffold_1870_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9781..10188)
DNA (408bp) protein (136aa)
50S ribosomal protein L16 Tax=Acaryochloris marina (strain MBIC 11017) RepID=RL16_ACAM1
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
rplP; 50S ribosomal protein L16
PLM1_100_b1_sep16_scaffold_1870_22
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10206..10883)
DNA (678bp) protein (226aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
30S ribosomal protein S3 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
30S ribosomal protein S3
PLM1_100_b1_sep16_scaffold_1870_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10944..11282)
DNA (339bp) protein (113aa)
50S ribosomal protein L22 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E9A4_FLESM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
LSU ribosomal protein L22P
PLM1_100_b1_sep16_scaffold_1870_24
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11324..11608)
DNA (285bp) protein (95aa)
30S ribosomal protein S19 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS19_SOLUE
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
rpsS; 30S ribosomal protein S19
PLM1_100_b1_sep16_scaffold_1870_25
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11643..12464)
DNA (822bp) protein (274aa)
50S ribosomal protein L2 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=RL2_GEOLS
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rplB; 50S ribosomal protein L2
PLM1_100_b1_sep16_scaffold_1870_26
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12479..12766)
DNA (288bp) protein (96aa)
50S ribosomal protein L23 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKT0_DESB2
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ribosomal protein L25/L23
PLM1_100_b1_sep16_scaffold_1870_27
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12766..13413)
DNA (648bp) protein (216aa)
50S ribosomal protein L4 Tax=Clostridium ultunense Esp RepID=M1Z7Q6_9CLOT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
50S ribosomal protein L4
PLM1_100_b1_sep16_scaffold_1870_28
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists


comp(13410..14051)
DNA (642bp) protein (214aa)
50S ribosomal protein L3 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKI6_DESK7
50S ribosomal protein L3
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM1_100_b1_sep16_scaffold_1870_29
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14064..14372)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 Tax=Anaeromyxobacter RepID=RS10_ANAD2
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Displaying 29 items

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