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PLM1_100_b1_sep16_scaffold_6548

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_6548_1
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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1..555
DNA (555bp) protein (185aa)
ABC transporter-related protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0T6_LEPCP
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM1_100_b1_sep16_scaffold_6548_2
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

552..1322
DNA (771bp) protein (257aa)
sugar ABC transporter permease Tax=Burkholderia bryophila RepID=UPI000380263F
ABC-2 type transporter family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM1_100_b1_sep16_scaffold_6548_3
unknown

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1687..1818
DNA (132bp) protein (44aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6548_4
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1926..2546
DNA (621bp) protein (207aa)
acpD; acyl-carrier-protein phosphodiesterase (EC:3.1.4.14)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
FMN-dependent NADH-azoreductase Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IT67_HERSS
PLM1_100_b1_sep16_scaffold_6548_5
unknown

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2565..2750
DNA (186bp) protein (62aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6548_6
unknown

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3063..3569
DNA (507bp) protein (169aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6548_7
RLO_RIF05_58_11, RIF5, Bacteria

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3878..4228
DNA (351bp) protein (117aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI0003482520
ArsR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM1_100_b1_sep16_scaffold_6548_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4212..4751
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PEE2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41022.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
activator of Hsp90 ATPase 1 family protein
PLM1_100_b1_sep16_scaffold_6548_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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4748..5731
DNA (984bp) protein (328aa)
Putative glutathione S-transferase-related transmembrane protein bin=GWF2_OP9-related_38_17 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM1_100_b1_sep16_scaffold_6548_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5905..7002
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Hoeflea sp. 108 RepID=UPI000378EB3D
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47314.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
beta-lactamase
PLM1_100_b1_sep16_scaffold_6548_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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7123..7554
DNA (432bp) protein (144aa)
dehydrogenase Tax=Pseudomonas mandelii RepID=UPI000369309C
Dehydrogenase {ECO:0000313|EMBL:KIO48215.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
dehydrogenase
PLM1_100_b1_sep16_scaffold_6548_12
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7586..9034
DNA (1449bp) protein (483aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Polaromonas sp. CF318 RepID=J2TG90_9BURK
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJL77422.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
EmrB/QacA subfamily drug resistance transporter
PLM1_100_b1_sep16_scaffold_6548_13
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9179..9595
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R80_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD71723.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
PLM1_100_b1_sep16_scaffold_6548_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9635..10057
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Rhodanobacter sp. 115 RepID=I4VML0_9GAMM
Gfa-like protein {ECO:0000313|EMBL:AKF10835.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
aldehyde-activating protein
PLM1_100_b1_sep16_scaffold_6548_15
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10111..10572
DNA (462bp) protein (154aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Azoarcus sp. KH32C RepID=H0PYS0_9RHOO
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM1_100_b1_sep16_scaffold_6548_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10586..10942
DNA (357bp) protein (119aa)
dehydrogenase Tax=Pseudomonas aeruginosa RepID=UPI0003AC603A
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM1_100_b1_sep16_scaffold_6548_17
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10956..11429
DNA (474bp) protein (158aa)
3-demethylubiquinone-9 3-methyltransferase Tax=Saccharopolyspora erythraea RepID=A4FEG9_SACEN
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KJY43879.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;"
3-demethylubiquinone-9 3-methyltransferase
PLM1_100_b1_sep16_scaffold_6548_18
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11416..11889
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3V4Z5_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EPG76498.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_6548_19
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11993..12157
DNA (165bp) protein (55aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_66_88 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM1_100_b1_sep16_scaffold_6548_20
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12179..12586
DNA (408bp) protein (136aa)
hypothetical protein Tax=Halomonas sp. KM-1 RepID=UPI0002882E7D
Uncharacterized protein {ECO:0000313|EMBL:EWH03006.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
DGPF domain-containing protein
PLM1_100_b1_sep16_scaffold_6548_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12550..13080
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Ralstonia RepID=E2SV58_9RALS
Variovorax paradoxus strain MEDvA23 contig_136, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16167.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
polyketide cyclase/dehydrase family protein
PLM1_100_b1_sep16_scaffold_6548_22
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13199..14317
DNA (1119bp) protein (373aa)
Sugar phosphate permease Tax=Polaromonas sp. CF318 RepID=J2KAZ5_9BURK
Sugar phosphate permease {ECO:0000313|EMBL:EJL77420.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
major facilitator transporter
Displaying 22 items

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