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PLM1_100_b1_sep16_scaffold_5536

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_5536_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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3..581
DNA (579bp) protein (193aa)
cytochrome C oxidase subunit III bin=GWD2_Deltaproteobacteria_55_8 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidase, subunit 3
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_5536_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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666..923
DNA (258bp) protein (86aa)
id=1881834 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_5536_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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920..1528
DNA (609bp) protein (203aa)
Cytochrome c oxidase subunit III bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ctaE; putative transmembrane cytochrome oxidase subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_5536_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1552..1830
DNA (279bp) protein (93aa)
Caa(3)-type oxidase, subunit IV bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
caa(3)-type oxidase subunit IV
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_5536_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1827..2243
DNA (417bp) protein (139aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_5536_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2370..3092
DNA (723bp) protein (241aa)
L-aspartate dehydrogenase (EC:1.4.1.21)
Probable L-aspartate dehydrogenase bin=GWD2_Deltaproteobacteria_55_8 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_5536_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3210..4805
DNA (1596bp) protein (532aa)
Acetolactate synthase bin=GWB1_Spirochaetes_59_5 species=Nitratireductor indicus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
acetolactate synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_5536_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4821..6245
DNA (1425bp) protein (475aa)
Probable L-aspartate dehydrogenase bin=GWD2_Deltaproteobacteria_55_8 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_5536_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(6196..6354)
DNA (159bp) protein (53aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM1_100_b1_sep16_scaffold_5536_10
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

6996..7526
DNA (531bp) protein (177aa)
Hypothetical membrane protein bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM1_100_b1_sep16_scaffold_5536_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7622..8455
DNA (834bp) protein (278aa)
Response regulator receiver protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_5536_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8455..9081
DNA (627bp) protein (209aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_b1_sep16_scaffold_5536_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9053..10021)
DNA (969bp) protein (323aa)
Alcohol dehydrogenase, zinc-binding domain protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTC6_ROSS1
alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_5536_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10085..11581)
DNA (1497bp) protein (499aa)
Amidase bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 14 items

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