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PLM1_100_b1_sep16_scaffold_5642

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_5642_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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3..191
DNA (189bp) protein (63aa)
CmpX protein bin=GWD2_Deltaproteobacteria_55_8 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_5642_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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294..647
DNA (354bp) protein (118aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] bin=GWD2_Chloroflexi_49_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_5642_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

650..1609
DNA (960bp) protein (320aa)
Isocitrate dehydrogenase [NADP] bin=GWC2_Chloroflexi_49_37 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
isocitrate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_5642_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1684..2628
DNA (945bp) protein (315aa)
Malate dehydrogenase bin=GWD2_Deltaproteobacteria_55_8 species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
malate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_5642_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2710..3873
DNA (1164bp) protein (388aa)
sucC; Succinyl-CoA ligase [ADP-forming] subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta bin=GWD2_Deltaproteobacteria_55_8 species=Bacillus coagulans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_5642_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3942..4814
DNA (873bp) protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
succinyl-CoA synthetase subunit alpha
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_5642_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4814..5233
DNA (420bp) protein (140aa)
Nucleoside diphosphate kinase Tax=uncultured gamma proteobacterium RepID=H5S9K8_9GAMM
ndk2; nucleoside diphosphate kinase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_5642_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5457..6032
DNA (576bp) protein (192aa)
Dual-specificity RNA methyltransferase RlmN Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=RLMN_DESOH
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 8 items

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