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PLM1_100_b1_sep16_scaffold_6052

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_6052_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1..567
DNA (567bp) protein (189aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase Tax=Syntrophus aciditrophicus (strain SB) RepID=DAPB_SYNAS
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_6052_2
unknown

Not on your lists

714..848
DNA (135bp) protein (45aa)
glycyl-tRNA synthetase
PLM1_100_b1_sep16_scaffold_6052_3
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(1345..3177)
DNA (1833bp) protein (611aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
subtilase family serine protease
Tax=GWC2_Nitrospirae_57_9_curated
PLM1_100_b1_sep16_scaffold_6052_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3174..3743)
DNA (570bp) protein (190aa)
Putative uncharacterized protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RW3_SYMTH
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_6052_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4201..5667
DNA (1467bp) protein (489aa)
Glycine--tRNA ligase bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_6052_6
R_NC10_66_22, NC10, Bacteria

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5874..6734
DNA (861bp) protein (287aa)
ABC transporter, ATPase subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJI3_9BACT
ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_b1_sep16_scaffold_6052_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

6851..7441
DNA (591bp) protein (197aa)
ABC transporter, ATPase subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJI3_9BACT
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:CBE69568.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM1_100_b1_sep16_scaffold_6052_8
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

7438..9255
DNA (1818bp) protein (606aa)
ABC-type multidrug/protein/lipid transport system, ATPase component Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJI2_9BACT
MdlB; ABC-type multidrug/protein/lipid transport system, ATPase component
Tax=RBG_16_NC10_65_8_curated
PLM1_100_b1_sep16_scaffold_6052_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9530..10750)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein Tax=uncultured bacterium 89 RepID=E3T681_9BACT
protein of unknown function DUF1501
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_6052_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10753..11292)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CED4_MYXFH
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_6052_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11231..12013)
DNA (783bp) protein (261aa)
hypothetical protein bin=bin7_NC10_sister species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_6052_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12229..12870)
DNA (642bp) protein (214aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_6052_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12867..13115)
DNA (249bp) protein (83aa)
id=1777803 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_6052_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13130..13648)
DNA (519bp) protein (173aa)
id=1777804 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_6052_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13657..14316)
DNA (660bp) protein (220aa)
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RNA polymerase sigma-e factor
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_6052_16
unknown

Not on your lists

14714..15019
DNA (306bp) protein (102aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6052_17
unknown

Not on your lists

15123..15269
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 17 items

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