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PLM1_100_b1_sep16_scaffold_9873

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_9873_1
unknown

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comp(3..158)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_9873_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(653..1189)
DNA (537bp) protein (179aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_9873_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1292..2323)
DNA (1032bp) protein (344aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_9873_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2666..3673
DNA (1008bp) protein (336aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_9873_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3823..4146
DNA (324bp) protein (108aa)
oxidoreductase molybdopterin binding protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative sulfite oxidase subunit YedY
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM1_100_b1_sep16_scaffold_9873_6
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4202..4756
DNA (555bp) protein (185aa)
TMAO/DMSO reductase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5CC0A
oxidoreductase molybdopterin binding protein
Tax=GWA2_Deltaproteobacteria_55_10_curated
PLM1_100_b1_sep16_scaffold_9873_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4847..5758)
DNA (912bp) protein (304aa)
serine--pyruvate transaminase (EC:2.6.1.51)
Serine--pyruvate transaminase {ECO:0000313|EMBL:ACY14338.1}; EC=2.6.1.51 {ECO:0000313|EMBL:ACY14338.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Serine--pyruvate transaminase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXY3_HALO1
PLM1_100_b1_sep16_scaffold_9873_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6363..7250)
DNA (888bp) protein (296aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase Tax=Rhizobium sp. CF080 RepID=J3C4D3_9RHIZ
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM1_100_b1_sep16_scaffold_9873_9
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7504..7857
DNA (354bp) protein (118aa)
MscS Mechanosensitive ion channel Tax=Ralstonia pickettii RepID=B2UBS1_RALPJ
mechanosensitive ion channel MscS
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EPX96612.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
Displaying 9 items

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