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PLM1_100_b1_sep16_scaffold_4159

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4159_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1..756
DNA (756bp) protein (252aa)
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4159_2
unknown

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comp(1064..1261)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4159_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1916..2545)
DNA (630bp) protein (210aa)
Maf-like protein maf bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
maf; septum formation protein Maf-like
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_4159_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2536..3693)
DNA (1158bp) protein (386aa)
putative tRNA-dihydrouridine synthase (EC:1.-.-.-)
tRNA-dihydrouridine synthase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4159_5
unknown

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comp(3886..4167)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4159_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4262..5053)
DNA (792bp) protein (264aa)
glpX; fructose-1,6-bisphosphatase, class II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase bin=GWC2_Deltaproteobacteria_42_51 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4159_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5038..6258)
DNA (1221bp) protein (407aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
cofactor-independent phosphoglycerate mutase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4159_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6464..7858)
DNA (1395bp) protein (465aa)
thrA; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Anoxybacillus flavithermus AK1 RepID=M8D327_9BACI
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_4159_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..9081)
DNA (1179bp) protein (393aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1)
Putative PLP-dependent aminotransferase, putative aspartate aminotransferase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_4159_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9256..11394)
DNA (2139bp) protein (713aa)
ATP-dependent DNA helicase bin=GWD2_Deltaproteobacteria_55_8 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
recG; ATP-dependent DNA helicase RecG
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_4159_11
unknown

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comp(11464..11571)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 11 items

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