ggKbase home page

PLM1_100_b1_sep16_scaffold_4225

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4225_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58..729
DNA (672bp) protein (224aa)
hypothetical protein bin=bin7_NC10_sister species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4225_2
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

967..1971
DNA (1005bp) protein (335aa)
hypothetical protein
Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
PLM1_100_b1_sep16_scaffold_4225_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2587..3729
DNA (1143bp) protein (381aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase Tax=Mycobacterium avium 10-5560 RepID=V7P3I5_MYCAV
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4225_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3826..4881)
DNA (1056bp) protein (352aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4225_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4925..5968)
DNA (1044bp) protein (348aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative TIM-barrel fold metal-dependent hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_b1_sep16_scaffold_4225_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6115..6648)
DNA (534bp) protein (178aa)
reactivating factor for ethanolamine ammonia lyase Tax=Massilia niastensis RepID=UPI000381C71D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 6 items

View Taxonomy