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PLM1_100_b1_sep16_scaffold_4736

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4736_1
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..440
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUZ3_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE15343.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM1_100_b1_sep16_scaffold_4736_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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977..2512
DNA (1536bp) protein (512aa)
Integral membrane sensor signal transduction histidine kinase Tax=Clostridium sp. CAG:221 RepID=R6FSR2_9CLOT
PAS domain S-box
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4736_3
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2697..5048
DNA (2352bp) protein (784aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) Tax=Nitrosospira sp. APG3 RepID=M5DJT8_9PROT
response regulator receiver/GGDEF/EAL domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
PLM1_100_b1_sep16_scaffold_4736_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5969..6244
DNA (276bp) protein (92aa)
Putative Histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
multi-sensor signal transduction histidine kinase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_b1_sep16_scaffold_4736_5
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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6331..7932
DNA (1602bp) protein (534aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6B6F6_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36087.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM1_100_b1_sep16_scaffold_4736_6

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7988..9079
DNA (1092bp) protein (364aa)
Transposase Tax=mine drainage metagenome RepID=T1DEM6_9ZZZZ
Transposase {ECO:0000313|EMBL:EQD67603.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase ISLbp6
PLM1_100_b1_sep16_scaffold_4736_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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9109..10320
DNA (1212bp) protein (404aa)
GAF sensor signal transduction histidine kinase bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4736_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10691..11722)
DNA (1032bp) protein (344aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_4736_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11743..12369)
DNA (627bp) protein (209aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003664DDE
FMN binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM1_100_b1_sep16_scaffold_4736_10
unknown

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12634..12933
DNA (300bp) protein (100aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4736_11
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(13243..13839)
DNA (597bp) protein (199aa)
Uncharacterized protein bin=GWF2_OP3_43_52 species=Acinetobacter sp. ANC 3929 genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=GWF2_WOR_2_43_52_curated
PLM1_100_b1_sep16_scaffold_4736_12
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13847..14236)
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TYK7_9PROT
cytoplasmic protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
Displaying 12 items

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