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PLM1_100_b1_sep16_scaffold_4758

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4758_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4758_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177..500)
DNA (324bp) protein (108aa)
Glutaredoxin Tax=uncultured bacterium RepID=Q6RJL3_9BACT
grxD; glutaredoxin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4758_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(526..780)
DNA (255bp) protein (85aa)
BolA family protein bin=GWD2_Deltaproteobacteria_55_8 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
transcriptional regulator, BolA protein family
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4758_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(842..1204)
DNA (363bp) protein (121aa)
Cold-shock DNA-binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_4758_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1217..1345)
DNA (129bp) protein (43aa)
id=1956125 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_4758_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1388..2371)
DNA (984bp) protein (328aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4758_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2695..3444)
DNA (750bp) protein (250aa)
short-chain dehydrogenase/reductase SDR bin=bin3_NC10 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4758_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3477..4373
DNA (897bp) protein (299aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4758_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4318..5070)
DNA (753bp) protein (251aa)
GDSL-like Lipase/Acylhydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=Xenococcus sp. PCC 7305 genus=Xenococcus taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GDSL family lipase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_4758_10
unknown

Not on your lists

5647..6072
DNA (426bp) protein (142aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4758_11
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(6275..6706)
DNA (432bp) protein (144aa)
Putative peptidoglycan binding domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI06_CHLTF
hypothetical protein
Tax=GWC2_Nitrospirae_57_9_curated
PLM1_100_b1_sep16_scaffold_4758_12
unknown

Not on your lists

7304..7534
DNA (231bp) protein (77aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4758_13
unknown

Not on your lists

7548..8201
DNA (654bp) protein (218aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4758_14
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8416..9423)
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036C09A3
Possible AAA ATPase family protein {ECO:0000313|EMBL:EAW39009.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
AAA ATPase central protein
PLM1_100_b1_sep16_scaffold_4758_15
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(9431..9868)
DNA (438bp) protein (146aa)
hypothetical protein
Transposase, Y1_Tnp domain-containing bin=GWC2_Nitrospirae_57_13 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RBG_16_Acidobacteria_68_9_curated
PLM1_100_b1_sep16_scaffold_4758_16
unknown

Not on your lists

comp(9972..10250)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4758_17
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10316..12283)
DNA (1968bp) protein (656aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WUL2_9NOST
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AFZ23898.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
PLM1_100_b1_sep16_scaffold_4758_18
Eimeria maxima, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(12831..14873)
DNA (2043bp) protein (681aa)
PREDICTED: nucleoprotein TPR-like isoform X4 Tax=Pundamilia nyererei RepID=UPI0003AF5344
Uncharacterized protein {ECO:0000313|EMBL:CDJ56446.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria maxima (Coccidian parasite).;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_4758_19
unknown

Not on your lists

15172..15426
DNA (255bp) protein (85aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4758_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15523..15822)
DNA (300bp) protein (100aa)
hypothetical protein Tax=Thioalkalivibrio sp. HL-Eb18 RepID=UPI0003691E3C
transposase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 20 items

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