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PLM1_100_b1_sep16_scaffold_7210

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_7210_1
RBG_16_NC10_65_8_curated, NC10, Bacteria

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108..857
DNA (750bp) protein (250aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035F7B1C
short-chain dehydrogenase/reductase sdr
Tax=RBG_16_NC10_65_8_curated
PLM1_100_b1_sep16_scaffold_7210_2
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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924..1559
DNA (636bp) protein (212aa)
O-methyltransferase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UN21_MYXSD
O-methyltransferase {ECO:0000313|EMBL:AKF83411.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
O-methyltransferase
PLM1_100_b1_sep16_scaffold_7210_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1894..2778)
DNA (885bp) protein (295aa)
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
pseudouridine synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_7210_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2924..4000
DNA (1077bp) protein (359aa)
Chorismate mutase Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E445_GEOLS
chorismate mutase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_7210_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3997..4926
DNA (930bp) protein (310aa)
histidinol phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_7210_6
unknown

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4935..5039
DNA (105bp) protein (35aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_7210_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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5072..5935
DNA (864bp) protein (288aa)
Prephenate dehydrogenase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tyrA; prephenate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_7210_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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5944..7230
DNA (1287bp) protein (429aa)
3-phosphoshikimate 1-carboxyvinyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
3-phosphoshikimate 1-carboxyvinyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_7210_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7274..7942
DNA (669bp) protein (223aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_7210_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7963..8694
DNA (732bp) protein (244aa)
30S ribosomal protein S1 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S1
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 10 items

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