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PLM1_100_b1_sep16_scaffold_2218

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2218_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2..235
DNA (234bp) protein (78aa)
Putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein; Glycolate oxidase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2218_2
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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comp(534..2696)
DNA (2163bp) protein (721aa)
Putative formate dehydrogenase alpha subunit Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I092_CALAS
putative formate dehydrogenase subunit alpha
Tax=GWB2_Chloroflexi_54_36_curated
PLM1_100_b1_sep16_scaffold_2218_3
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(2693..3394)
DNA (702bp) protein (234aa)
Putative formate dehydrogenase iron-sulfur protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I045_CALAS
putative formate dehydrogenase iron-sulfur protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM1_100_b1_sep16_scaffold_2218_4
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(3498..5219)
DNA (1722bp) protein (574aa)
Putative formate dehydrogenase beta subunit bin=GWB2_Chloroflexi_54_36 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
putative formate dehydrogenase beta subunit
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM1_100_b1_sep16_scaffold_2218_5
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5320..6000
DNA (681bp) protein (227aa)
Protein FdhD homolog Tax=Moorea producens 3L RepID=F4XXN7_9CYAN
formate dehydrogenase family accessory protein FdhD
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
PLM1_100_b1_sep16_scaffold_2218_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5913..6707)
DNA (795bp) protein (265aa)
id=2104314 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2218_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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6821..7177
DNA (357bp) protein (119aa)
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (7-cyano-7-carbaguanine reductase) (PreQ(0) reductase) (NADPH-dependent nitrile oxidoreductase) (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=Nitrospina gracilis 3/211 RepID=M1YG17_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2218_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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7481..8854
DNA (1374bp) protein (458aa)
Replicative DNA helicase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dnaB-1; replicative DNA helicase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2218_9
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9498..9809
DNA (312bp) protein (104aa)
DNA ligase (EC:6.5.1.1)
ATP dependent DNA ligase, central Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GP0_DECAR
Tax=BJP_IG2103_Dechloromonas_60_92
Displaying 9 items

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