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PLM1_100_b1_sep16_scaffold_2779

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2779_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..385)
DNA (384bp) protein (128aa)
Holliday junction ATP-dependent DNA helicase RuvA bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ruvA; Holliday junction DNA helicase ruvA
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_2779_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425..994)
DNA (570bp) protein (190aa)
Holliday junction endonuclease RuvC bin=GWD2_Deltaproteobacteria_55_8 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ruvC; Holliday junction resolvase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_2779_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1000..1746)
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein NPH_1078 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2779_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2147..2695
DNA (549bp) protein (183aa)
Rare lipoprotein A bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rare lipoprotein A
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_2779_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2696..4096
DNA (1401bp) protein (467aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_2779_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4072..5019)
DNA (948bp) protein (316aa)
Predicted beta-lactamase family protein bin=GWD2_Deltaproteobacteria_55_8 species=gamma proteobacterium HdN1 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_2779_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5314..6051)
DNA (738bp) protein (246aa)
aconitate hydratase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000373C044
aconitate hydratase 1
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2779_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6048..7982)
DNA (1935bp) protein (645aa)
acnA; aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase 1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08T56_STIAD
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_2779_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8182..9180
DNA (999bp) protein (333aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_2779_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9633..10064
DNA (432bp) protein (144aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000306532C
heat-shock protein Hsp20
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_2779_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10061..12469
DNA (2409bp) protein (803aa)
lon; DNA-binding ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETX7_BRASB
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2779_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12838..13368
DNA (531bp) protein (177aa)
carD-like transcriptional regulator; K07736 CarD family transcriptional regulator bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
cdnL; CarD family transcriptional regulator CdnL
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_2779_13
unknown

Not on your lists

13316..13639
DNA (324bp) protein (108aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2779_14
Synechococcus sp. WH 5701, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13891..14439
DNA (549bp) protein (183aa)
Possible rare lipoprotein A Tax=Synechococcus sp. WH 5701 RepID=A3YUQ7_9SYNE
Possible rare lipoprotein A {ECO:0000313|EMBL:EAQ76775.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH 5701.;"
lipoprotein
Displaying 14 items

View Taxonomy