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PLM1_100_b1_sep16_scaffold_3140

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_3140_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1117)
DNA (1116bp) protein (372aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADG7_THEID
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3140_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1127..1498)
DNA (372bp) protein (124aa)
UPF0102 protein MldDRAFT_2979/MldDRAFT_4743 Tax=delta proteobacterium MLMS-1 RepID=Q1NMK2_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3140_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1495..2214)
DNA (720bp) protein (240aa)
Ribonuclease H (EC:3.1.26.4)
Ribonuclease HII bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3140_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2333..2620
DNA (288bp) protein (96aa)
aspartyl/glutamyl-tRNA amidotransferase subunit C Tax=Microchaete sp. PCC 7126 RepID=UPI00034A2F51
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3140_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2617..4098
DNA (1482bp) protein (494aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3140_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4151..5599
DNA (1449bp) protein (483aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=GATB_GEODF
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3140_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5669..8047)
DNA (2379bp) protein (793aa)
Uncharacterized protein Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U2D7_ALIDB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3140_8
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8204..10861
DNA (2658bp) protein (886aa)
ATPase, AAA family Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A310_PELCD
AAA ATPase
ATPase, AAA family {ECO:0000313|EMBL:ABA89247.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
PLM1_100_b1_sep16_scaffold_3140_9
unknown

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11512..13260
DNA (1749bp) protein (583aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_3140_10
unknown

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13280..13606
DNA (327bp) protein (109aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_3140_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13635..14429
DNA (795bp) protein (265aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IA68_9CHLR
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM1_100_b1_sep16_scaffold_3140_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14461..15234
DNA (774bp) protein (258aa)
Histidine kinase HAMP region domain protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XYV4_9BACT
histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3140_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15271..16665
DNA (1395bp) protein (465aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_3140_14
unknown

Not on your lists

comp(17107..17283)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 14 items

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