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PLM1_100_b1_sep16_scaffold_3814

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_3814_1
R_OP11_Levybacteria_36_8b, Levybacteria, Microgenomates, Bacteria

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2..532
DNA (531bp) protein (177aa)
major facilitator superfamily MFS_1 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
major facilitator superfamily protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8b_curated
PLM1_100_b1_sep16_scaffold_3814_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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793..1350
DNA (558bp) protein (186aa)
sulfopyruvate decarboxylase (EC:4.1.1.79)
Sulfopyruvate decarboxylase subunit alpha bin=GWD2_Deltaproteobacteria_55_8 species=Methanosaeta thermophila genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_3814_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1363..2271
DNA (909bp) protein (303aa)
Putative phosphonopyruvate decarboxylase bin=GWA2_OP3_52_12 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
thiamine pyrophosphate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_3814_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2329..2949
DNA (621bp) protein (207aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_3814_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2998..3165
DNA (168bp) protein (56aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_3814_6
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

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comp(3281..6415)
DNA (3135bp) protein (1045aa)
Uncharacterized protein (Fragment) Tax=Xiphophorus maculatus RepID=M4A9N5_XIPMA
Smc-like protein {ECO:0000313|EMBL:ACI90344.1}; species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
cell surface protein
PLM1_100_b1_sep16_scaffold_3814_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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6842..7771
DNA (930bp) protein (310aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VQE2_9CYAN
putative periplasmic phosphonate binding protein component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3814_8
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(7959..8213)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Bdellovibrio exovorus JSS RepID=M4V5L3_9DELT
hypothetical protein
Tax=RBG_16_Bdellovibrionales_40_8_curated
PLM1_100_b1_sep16_scaffold_3814_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8585..9157
DNA (573bp) protein (191aa)
Amidohydrolase 2 Tax=Frankia sp. (strain EuI1c) RepID=E3J7T4_FRASU
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3814_10
unknown

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comp(8997..9374)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_3814_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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9600..9905
DNA (306bp) protein (102aa)
L-threonine 3-dehydrogenase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT82_PSEUX
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_3814_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9952..10626
DNA (675bp) protein (225aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI0003762627
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_3814_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10678..10902
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 13 items

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