ggKbase home page

PLM1_100_b1_sep16_scaffold_1372

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1372_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..338
DNA (336bp) protein (112aa)
ABC-type Fe3+ transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter substrate-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_1372_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(331..1527)
DNA (1197bp) protein (399aa)
Reductive dehalogenase bin=GWD2_Deltaproteobacteria_55_8 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_1372_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1633..2610)
DNA (978bp) protein (326aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_1372_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2827..3990)
DNA (1164bp) protein (388aa)
Formyl-CoA transferase Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRC1_9FIRM
formyl-CoA transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_1372_5
unknown

Not on your lists

4233..4742
DNA (510bp) protein (170aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1372_6
Cryptococcus neoformans, Filobasidiella, Tremellales, Tremellomycetes, Basidiomycota, Fungi

Not on your lists

4768..5280
DNA (513bp) protein (171aa)
Palmitoyltransferase AKR1; EC=2.3.1.225;; Ankyrin repeat-containing protein AKR1; species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Tremellaceae; Filobasidiella; Filobasidiella/Cryptococcus neoformans species complex.;" source="Cryptococcus neoformans var. neoformans serotype D (strain JEC21 /; ATCC MYA-565) (Filobasidiella neoformans).;"
Palmitoyltransferase AKR1 Tax=Cryptococcus neoformans var. neoformans RepID=AKR1_CRYNB
ankyrin
PLM1_100_b1_sep16_scaffold_1372_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5318..6403)
DNA (1086bp) protein (362aa)
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_1372_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6566..7057)
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Marinobacter sp. BSs20148 RepID=M1FI83_9ALTE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1372_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7090..8151)
DNA (1062bp) protein (354aa)
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TIM-barrel fold metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1372_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8271..9167)
DNA (897bp) protein (299aa)
RNA methylase bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM1_100_b1_sep16_scaffold_1372_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

9518..10552
DNA (1035bp) protein (345aa)
luciferase-like protein
Luciferase-like, subgroup bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_Chloroflexi_68_14_curated
PLM1_100_b1_sep16_scaffold_1372_12
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

10717..12264
DNA (1548bp) protein (516aa)
Deoxyhypusine synthase Tax=Xenococcus sp. PCC 7305 RepID=L8M6N6_9CYAN
deoxyhypusine synthase
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
Displaying 12 items

View Taxonomy