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PLM1_100_b1_sep16_scaffold_1843

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1843_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..571)
DNA (570bp) protein (190aa)
SpoVR family protein bin=GWA2_OP3_52_12 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
SpoVR family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_1843_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(582..1799)
DNA (1218bp) protein (406aa)
UPF0229 protein Nhal_0668 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWW7_NITHN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_1843_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1815..3749)
DNA (1935bp) protein (645aa)
PrkA AAA domain family bin=GWA2_OP3_52_12 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
PrkA AAA domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_1843_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4239..4769
DNA (531bp) protein (177aa)
Transcriptional activator RfaH bin=GWA2_OP3_52_12 species=gamma proteobacterium IMCC3088 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
nusg antitermination factor
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_1843_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5146..7665
DNA (2520bp) protein (840aa)
putative two-component hybrid sensor and regulator bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin7_NC10_sister organism_group=NC10
putative two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_1843_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7724..8437
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KKV9_9ACTO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1843_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8598..9245
DNA (648bp) protein (216aa)
id=14627273 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_1843_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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9625..9924
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1843_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9921..10322
DNA (402bp) protein (134aa)
id=1996489 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1843_10
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10472..10702
DNA (231bp) protein (77aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM1_100_b1_sep16_scaffold_1843_11
unknown

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comp(10808..10888)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 11 items

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