ggKbase home page
Advanced Search
Search Help

PLM1_100_b1_sep16_scaffold_257_31

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 28511..32608

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 1373.0
  • Bit_score: 2408
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 1370.0
  • Bit_score: 2057
  • Evalue 0.0
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 1375.0
  • Bit_score: 2451
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4098
ATGGAAGATCTGTTCAACTTATTCGAAAAACCGAAGAATCCACTAAGTTTTAACGCGATTAAAATTTCCGTCGCGTCGCCCGACAAGATCCGTTCCTGGTCGCATGGCGAAGTGAAGAAGCCCGAAACGATCAATTATCGTACCTTCAAGCCGGAGCGCGACGGCTTATTCTGCGCCAAAATTTTTGGTCCGACCAAGGATTACGAATGCAATTGCGGTAAATACAAACGCATGCGCCACCGCGGCGTGGTCTGCGAAAAATGCGGTGTCGAGGTTATTCAATCCAAAGTGCGCCGCGAACGCATGGGTCATATCGAGCTCGCGACTGCGGTAGTTCATATCTGGTTTCTCAAGAGCTTGCCGAGCCGCATCGGCGCCCTGCTCGATATGTCGCTCAAGGAAATCGAGAAAGTACTCTATTTCGAATCCTACATTGTCATCGATCCGGGCGAGACGCCGCTGCAGTACAAGGAGTTATTGACCGAAGCGCGCTATCGCAAAACGGTCGAAGAGCATGGCGGCAAATTCGTCGCTGAGATGGGCGCAGAGGCTGTGCGAAAGCTGCTCAAGGCCATCGACATAAACAAACTGGCCGACGAACTGCGCCAAGAAATGCGCGATGCCAATTCCGAAGTGCGGCGCAAAAAAATGGCCAAGCGGTTAAAGGTTATTAGTGCATTCAAAACCTCCGGTAATCGGCCGGAATGGATGGTTATGGAAGTGATCCCGGTGATTCCACCGGATCTCCGGCCATTGGTGCCGCTCGATGGCGGGCGGTTTGCGACTTCCGATTTGAACGATCTCTATCGCCGGGTGATCAACCGTAACAACCGTCTCAAACGGCTGATGGAGTTGAGCGCGCCGGACATGATTATCCGCAACGAAAAGCGCATGCTGCAAGAAGCGGTCGATGCTCTGTTCGACAACGGTCGGCGCGGTCGCGCCATCACCGGCCAAAATCGGCGGCCGCTTAAATCCTTGAGCGATATGCTCAAAGGCAAGACCGGTCGATTTCGTCAGAATTTGCTCGGCAAGCGCGTCGATTACTCGGGCCGCTCGGTTATCGTGGTCGGACCGGAGCTGCGGCTGCATCAATGCGGCCTGCCTAAGAAAATGGCTTTGGAATTATTCAAACCATTTATTTACAACAAGCTCGAAGAGCGCGGTCACGTAACGACCATCAAAAGCGCCAAGAAAATGGTCGAGCGCGAGCTGCCGGAAGTTTGGGATATTCTCGATGAAGTGATCCGTGAACACCCGGTGCTGCTCAACCGCGCGCCGACGCTGCATCGTCTTGGTATCCAAGCGTTCGAGCCGATCTTGATCGAAGGCAAAGCGATACAACTCCATCCGCTCGTGTGCGCGGCCTATAACGCGGATTTCGACGGTGACCAAATGGCGGTGCATGTGCCGCTCTCCGTCGAAGCGCAAGTCGAAGCCCGGGCGCTGATGATGTCGACGAACAATATTCTGTCCCCGGCCAACGGCAAGCCGATCATCGTGCCGACCCAGGACATCGTTTTGGGACTCTATTACATGACACGGGATCGTCTGCATGCCAAAGGGAGCGGTCGTGTTTTCAGCAATCCGAACGAAGCGCGCATCTCCTACGATCAGGGCGAAGTCGATCTTCAAGCGCCGGTCACCGTGAGAATCAACGGCGAGCGTGTGGATACCACGGTCGGGCGCGTGTTGCTCTATGAGATCGTGCCAACGGTTATCCCGTTCAAGGAAGTCAACCGGGTGATGAAAAAGAAAGAGCTCGCCAACCTGATCGATGTGAGCTACCGCTTGGCCGGCAATAAGGCGACCGTTATCCTCGCCGATCGTTTAAAGGACATCGGTTTCCAGAACGCTACCAAGGCGGGAATCTCCATTTCCATTAAAGACATGCTCATCCCACCGAGCAAAGAAGCGCTGCTCAAAAAAGCCCACGATGACGTGCGCGAGATCGAAGAACAGTACAAAAACGGGCTGATCACCGACGGCGAACGTTACAATAAGGTCGTCGACATCTGGGCGGAAGTAACGGACCGAATCGCGGACGAAATGCTGCGGGACCTGGGTACGGAGATGATCACCGATGACCAAGGCCACGAAGTTTCGGTGCCGAGCTTTAATCCAATTTTCATGATGGCCGACTCCGGCGCCCGCGGCAGCGCACAGCAGATTCGCCAGCTCGCCGGCATGCGCGGCTTAATGGCCAAACCCTCGGGCGAAATCATTGAGACGCCGATTACCGCGAATTTCCGCGAGGGGCTCACCGTGTTGCAATATTTCATCTCGACCCACGGCGCACGCAAGGGTCTGGCCGATACCGCATTGAAAACCGCAAATTCCGGTTATCTAACGCGTCGGTTGGTGGACGTCGCGCAAGATGCGGTGATCGCCGAACAGGATTGCGGCACCATGGACGGTATCGAAATCACGCCGTTGATGGAAGGCGGCGAGATCATCGAGCCGCTCGGTGATCGCGTGCTCGGGCGTGTCGCGTTGGAAGATGTCAAGGACCCATTCACCGGGGACGTGATCGTCAAAGCGAACCAGGAAATCAATGAAGAATTGGTCCAGCGGATCGAAGACTCCGGCTTGGAGCGGACCAAGATCCGCTCGGTGTTGACCTGCGCTACTCGCCGCGGCGTTTGCGTGATGTGCTACGGCCGCGATCTCGGCCGTGGACATATGATCAACCTAGGCGAGGCGGTCGGCGTGATCGCGGCGCAATCCATCGGCGAACCGGGAACTCAGCTGACGATGCGCACCTTCCACATCGGCGGCACCGCGAGCCGGCGCGCCGAGCAGACTACTTTGGAGTCGCGCAACGACGGTTTTATCAAGTTCATCAATGTCAACACCGTCGCCAACAAAGACGGCGATCTTGTGGTGATGAACCGCAACGGCGAAGTTGCCATCGTCGACTACCCGGAGGGTGAAAAAGGCCGTGAACGTGAACGTGAACGCTATCCGGTGGTCTACGGTGCCAAGTTCAAAAAGAAAAACGGGGCGCGCGTCAAAGCAGGCGAGCTCTTGGCCGAATGGGATCCATATACGATTCCAATTCTCACGGAAGTGAGCGGCGAGATCAAATTCGGTGACGTCATCGAAGGGGTCACAATGGAAGAAAAGGTCGACGAGCGCACCGGCCTGTCGACCAAGGTTATCACCGATTCCAAAGATGTCGACAAACGACCGCGCATCTCGATCAAGAATGTTGAGGGACAGACCGCGCGGCTGTCGGCTACAGCGGAAGCGCGTTATCTCATTCCGGTGGGCGCGCACATCAACGTCCAGGATGGGCAGACGGTTTTTGCCGGCGACGTCTTGGCGAAGATTCCGCGCGAAACGACCAAGACCAAGGATATCACGGGCGGCCTGCCTCGCGTTGCCGAGCTTTTTGAGGCGCGCAAGCCGAAAGAATTTGCCGTTATCACCGAAATCGACGGCGCCGTGTCTTTCGGCNNNNNACCCGAAGTCGGTGAGCCTCGGGAATATCTGATTCCCAAGGGTAAGCATATCAGCGTTCACGACAGCGATCGCGTTCGGGCCGGCGAGGCATTGATGGATGGCTCGTCCAACCCGCATGATATCCTGAACATTCTGGGCGAAAAAGCGCTAGCTAAGTACTTGGTCGACGAGGTGCAAGAGATTTATCGCCTACAGGGTGTCCGCATCAATGATAAACATATCGAAGTTATCGTCCGGCAAATGCTCCGGCGCGTGCGCATCAAGGAGGTGGGCGACACCGATTTCCTGGTCGGTGATCAAGTCGAGAAATGGCGCTTCGACGAGGAAAATCAAAAGTCGATCGTCGAACGGGGCAAGCCCGCAGTCGCAGAACCGCTGCTACTTGGAATCACCAAGGCGTCACTCTCGACAGAGAGTTTCATCTCGGCGGCGTCATTCCAGGAAACGACGAAGGTGCTCACGGAAGCAGCCATCCACGGCAAGGTCGATCTTCTTTGCGGTCTGAAAGAAAACGTAATTATGGGCCGTTTGATTCCCGCCGGGACGGGCGTGACCAAATATTCCAAAGCGGAAATTGAAATCGATGAACCGGAGGGTCCGAGCGCGGGAATTGCGGAAGCCGTGGGGGGCTGA
PROTEIN sequence
Length: 1366
MEDLFNLFEKPKNPLSFNAIKISVASPDKIRSWSHGEVKKPETINYRTFKPERDGLFCAKIFGPTKDYECNCGKYKRMRHRGVVCEKCGVEVIQSKVRRERMGHIELATAVVHIWFLKSLPSRIGALLDMSLKEIEKVLYFESYIVIDPGETPLQYKELLTEARYRKTVEEHGGKFVAEMGAEAVRKLLKAIDINKLADELRQEMRDANSEVRRKKMAKRLKVISAFKTSGNRPEWMVMEVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELSAPDMIIRNEKRMLQEAVDALFDNGRRGRAITGQNRRPLKSLSDMLKGKTGRFRQNLLGKRVDYSGRSVIVVGPELRLHQCGLPKKMALELFKPFIYNKLEERGHVTTIKSAKKMVERELPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLSVEAQVEARALMMSTNNILSPANGKPIIVPTQDIVLGLYYMTRDRLHAKGSGRVFSNPNEARISYDQGEVDLQAPVTVRINGERVDTTVGRVLLYEIVPTVIPFKEVNRVMKKKELANLIDVSYRLAGNKATVILADRLKDIGFQNATKAGISISIKDMLIPPSKEALLKKAHDDVREIEEQYKNGLITDGERYNKVVDIWAEVTDRIADEMLRDLGTEMITDDQGHEVSVPSFNPIFMMADSGARGSAQQIRQLAGMRGLMAKPSGEIIETPITANFREGLTVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDAVIAEQDCGTMDGIEITPLMEGGEIIEPLGDRVLGRVALEDVKDPFTGDVIVKANQEINEELVQRIEDSGLERTKIRSVLTCATRRGVCVMCYGRDLGRGHMINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGTASRRAEQTTLESRNDGFIKFINVNTVANKDGDLVVMNRNGEVAIVDYPEGEKGRERERERYPVVYGAKFKKKNGARVKAGELLAEWDPYTIPILTEVSGEIKFGDVIEGVTMEEKVDERTGLSTKVITDSKDVDKRPRISIKNVEGQTARLSATAEARYLIPVGAHINVQDGQTVFAGDVLAKIPRETTKTKDITGGLPRVAELFEARKPKEFAVITEIDGAVSFGXXPEVGEPREYLIPKGKHISVHDSDRVRAGEALMDGSSNPHDILNILGEKALAKYLVDEVQEIYRLQGVRINDKHIEVIVRQMLRRVRIKEVGDTDFLVGDQVEKWRFDEENQKSIVERGKPAVAEPLLLGITKASLSTESFISAASFQETTKVLTEAAIHGKVDLLCGLKENVIMGRLIPAGTGVTKYSKAEIEIDEPEGPSAGIAEAVGG*