ggKbase home page

PLM1_100_b1_sep16_scaffold_3355_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1395..1961)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7R9_METTP similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 187.0
  • Bit_score: 251
  • Evalue 4.50e-64
putative dTDP-4-deoxyrhamnose 3,5 epimerase similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 188.0
  • Bit_score: 255
  • Evalue 8.90e-66
Putative dTDP-4-deoxyrhamnose 3,5 epimerase {ECO:0000313|EMBL:AIJ04937.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. JH146.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 188.0
  • Bit_score: 255
  • Evalue 4.40e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanocaldococcus sp. JH146 → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 567
ATGCCTTTTAAGTTTACTAGAACCGCTATCGCCGAAGTCGTCGTCATCGACCCTCAAGTCTTTGCCGATCATCGCGGTTTTTTCATGGAAACGTACAAACGTTCCGAATTTGCCGCCGAGGGAATTACCGAGACATTTGTTCAAGGCAATCACTCGAGATCGTCCAACGGAATCCTTCGCGGGCTGCATTATCAGAAACAGCCGAAAGCCCAAGGCAAACTAGTTCGAGCGCTCGCCGGTGAGATCTACGACGTAGTCGTCGATATTCGGCAAGGCTCACCTGGGTTCGGCGCATGGGTGGCTGTTTCGCTGTCATCGGCCGATCGACAGATGCTCTACGTACCGCCCGGTTTTGCTCATGGGTTTTGCGTCGTCAGCGACGAGGCCGAAATTTCTTACATGACAACAGAAGAATATGCTCCCGCACTTGAAGCGGGTGTGATTTGGAACGACCCGGACTTAGGACTCGCATGGCCAATCGTGAACCCGCAGCTCTCCGACCGAGACCGCCGCTGGCCGTGCCTCAAAGACGCCGACAACAATTTCCGTTACCACTCAGAATCTTAG
PROTEIN sequence
Length: 189
MPFKFTRTAIAEVVVIDPQVFADHRGFFMETYKRSEFAAEGITETFVQGNHSRSSNGILRGLHYQKQPKAQGKLVRALAGEIYDVVVDIRQGSPGFGAWVAVSLSSADRQMLYVPPGFAHGFCVVSDEAEISYMTTEEYAPALEAGVIWNDPDLGLAWPIVNPQLSDRDRRWPCLKDADNNFRYHSES*