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PLM1_100_b1_sep16_scaffold_3355_9

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 8200..10311

Top 3 Functional Annotations

Value Algorithm Source
Multi-sensor signal transduction histidine kinase bin=GWA2_OP3_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 26.9
  • Coverage: 720.0
  • Bit_score: 240
  • Evalue 3.90e-60
sensor histidine kinase, GAF domain-containing similarity KEGG
DB: KEGG
  • Identity: 26.5
  • Coverage: 642.0
  • Bit_score: 199
  • Evalue 2.20e-48
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 27.3
  • Coverage: 714.0
  • Bit_score: 308
  • Evalue 1.30e-80

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Taxonomy

RLO_RIF03_38_15 → RIF3 → Bacteria

Sequences

DNA sequence
Length: 2112
ATGGATTCAATTTTTAACCTGAATATGCTGCTGACGGCTAATCTCGTCCTGTTGGCCTGTTTGTTTTTTTATTTACTCACAAAGATCAAACGGCACCCGAGCGTCGCATATTTAATTGCCAGTTTGACGCCGCTGATCGCATTTGAATTAGGATCCTACCTTTTTAGTAATTGGCCCAACTCACCGGACGGTGCGAGGCTGATCGTCATCGGAGTGATTCTTACGCCACTCAGCGTTGTTCCGCTCAGCCAAACCCTGGGGCGCTCCGGCACGGTGCGCCGACAAAGAATCTGGATTGCGTATTACGTGTTGCAGCTTCTTTTGCTCATTCTTGCTATCCGCGCGATCTTTGAAGGACAGCTTATCGAGTGGGTCACCGGCATCTTGGACCAGCCAATCATCCTTGTCGATCAGATTTGGCGGTATTACTTTCTAAACGTGATCGCGACGAGCGCGCTCGCGCTGATGTGTTTTGACAAAACGCTTCAACAAGCTAACAAATCACAGAAAGACAAGCTTAAGTTCTTCTTGATCGCGTTTCTAGGGTTCATCGTATATTTCGGTTACCTGTCGGTTAACATCCTTTTGTCCTCTTATATCTCGTACGCGACGGTGCAATCGGGTGCCTTCGTTATGTTCTTTGGATTGGTTTTTCTCGTCTACGGCGCCGCGAAATACCCGTTCTGGGATGTCAAGATTCGCGTCTCCCGGAACGTCGTATTCGGCGGCTTCTCCGCGATCACAGCGCTCTTTTATTTGATTATTTCAGGAAGCGTTCTTGACATTCTTCGCTGGCTGCAACCGCACGGATTTAACACCGTGCTTCCTGCTGCGGTCTTCGTTTTAGTCGGGCTTTTTCTTACTTTTTATTTGTCTCCGGGTTTTCACAGCTCGGTGCGAGGGTTCATCACCAGACACTTTTTCCACAACAAATATGATTATCGGGACATGTGGATGAAATTCTCCGACAAGTCCGGTGGTTCACTCAACATTCGAGACGTTCTGCCACGCGTGGCCGAATTTGTCGCAGACGCAATGTTTGTTCGGCAGGTGGCTTTTTGGCTCCGATCAACGACGTCGGAAACCTATAATCTAGCCTACTCTCATGATCGAGCATCAGACGCCATGGCACATTCACTCCCGCTTCGGTTGGATCGCTCGCGTAGTCCCGACAAGAATTCAATCGTCCTTACTGTGCCGGCCGATGCCATGGCGATCGCGACGAATCATTTTCCGATCGATAAGATTCAGCCTCTAAAAGAATTGGGAATTCAACGTTTGGTGTTGGTGGAAAAAGGGAACGAAGTTTTGGCCTTGGTGGGCGTAGGCTCGCAGCCGGGCGGTGAAAAGTTCTCAGCGGAAGACGATCAATTCTTGTTGAGCGTGAGCAATCAACTGAGCTATTTGATCTTAAACCATAAACTCTCGGAAGAGCTCTTGCTCTCGCGAGAGTGGGAATCGTTCAATCGCTTCGCGTCGTTCATTCTTCACGACTTAAAGAACCTCGCCACGCTACAAGGAATGACGCTAGAGAACGCCAAACATCTTAGCCACAATCCGAATTTTGTCACCGACGCGTTCGCGACTTTCAGCCAGACCACGGACAAGATGATCAACCTGATCGCGAGTCTTTCGGTCCAGAGAGGCCAATTCTCACTCAAACAAAAACCCGTCAACATTCTGGAAATACTCACCACCACCTTCGATGATCTTAAAATCGGCCAGCGAAATGGCGTCAAGGTAATGACGACGTTTCCATCGAAAAGTAAACTGCCGGTAATATCCGGCGATGCCGAGCTGCTCCAAAAAGCCTTTACGAACCTGCTTCTCAACGCTATTCAAAGTCTACCCAAGGGACAAGGCGCCGTGGAGGTTACCGTGTCGGAAGAGGTAGCTGGTAAAATTACCACCTCGATTCGTGATACCGGTTGTGGTATCCCGCCCGAACGACTGGAAACTCTATTTCGCCCTTTTCAGACCACCAAGGAAAGGGGAATGGGAATTGGTCTTTGCCATACGCGCTCGATTATTGAAGTCCATGGAGGACAGATTCGCATAGAAAGTCAGGTGAACGCCGGCACGCGCGTCGAGGTCGAATTGCCGACGCTCTAG
PROTEIN sequence
Length: 704
MDSIFNLNMLLTANLVLLACLFFYLLTKIKRHPSVAYLIASLTPLIAFELGSYLFSNWPNSPDGARLIVIGVILTPLSVVPLSQTLGRSGTVRRQRIWIAYYVLQLLLLILAIRAIFEGQLIEWVTGILDQPIILVDQIWRYYFLNVIATSALALMCFDKTLQQANKSQKDKLKFFLIAFLGFIVYFGYLSVNILLSSYISYATVQSGAFVMFFGLVFLVYGAAKYPFWDVKIRVSRNVVFGGFSAITALFYLIISGSVLDILRWLQPHGFNTVLPAAVFVLVGLFLTFYLSPGFHSSVRGFITRHFFHNKYDYRDMWMKFSDKSGGSLNIRDVLPRVAEFVADAMFVRQVAFWLRSTTSETYNLAYSHDRASDAMAHSLPLRLDRSRSPDKNSIVLTVPADAMAIATNHFPIDKIQPLKELGIQRLVLVEKGNEVLALVGVGSQPGGEKFSAEDDQFLLSVSNQLSYLILNHKLSEELLLSREWESFNRFASFILHDLKNLATLQGMTLENAKHLSHNPNFVTDAFATFSQTTDKMINLIASLSVQRGQFSLKQKPVNILEILTTTFDDLKIGQRNGVKVMTTFPSKSKLPVISGDAELLQKAFTNLLLNAIQSLPKGQGAVEVTVSEEVAGKITTSIRDTGCGIPPERLETLFRPFQTTKERGMGIGLCHTRSIIEVHGGQIRIESQVNAGTRVEVELPTL*