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PLM1_100_b1_sep16_scaffold_1365_12

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(9216..10178)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWA2_OP3_52_12 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 314.0
  • Bit_score: 484
  • Evalue 7.10e-134
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 303.0
  • Bit_score: 337
  • Evalue 4.00e-90
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 314.0
  • Bit_score: 476
  • Evalue 2.70e-131

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Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGTCCGAAGACGATAAAAGCACCCCATTGGACTTTGCACTACCGGAGATCGGGCTGCCAAAATTCGTTGAAGAGGACGATGGTGAGACAAGGCCGAAAAACCGGGCCCTTGTTCCTTTCGATCCGCTGCAGCGTTATCTGACAGAAATCCGCCGTTTCCCGTTGCTCAGCCGCGAGGAAGAACACCAGCTCGCCGTTCAATACAAGGAGTATGGAAATATCGAGGCGGCGTACAAGCTGGTAACCTCGAACCTGCGGCTCGTCGTGATGATCGCTCGCGAGTATCAGAAAGCCTTCAAGAACCTGCTCGATCTCATTCAGGAAGGCAACATGGGACTCATGGAGGCGATAAAAAATTTCGATCCCTATCGCGGCGTTCGCTTCCCCTCTTACGCCGTATGGTGGATTCGCGCGTACATGATCCGCTACATCATGAACGATTGGCGCATGGTCAAAATCGGCACGACGCAGGCTCAGCGAAAACTCTTTTTCAACTTGCAGAAAGAAAAAGACAGAATCGAGGCAGAGGGTTTGACGCCGGGTCCCAAGTTGCTTGCGGAACGTCTGAACGTGAAAGAGGACGAGGTCGTGGAGATGCAGCAGCGGCTGGGCAGCCGCGACCTGTCGGTGGACATACCGATCGGAGAGGATGACGAGGCGACGCTGCTGAATTTTCTGCAGGATAATAAGCAGACCCCGGAAGAGCAATTCGCCGAGACCCAATATCGTGATTTGCTGCGCCACAAAATGGACCAATTCGCGAAAGGGTTGAAGGACAAAGAGCTGGTCATTTATCGGGAAAGACTGTTAAACGAAGATCCCCTGACGCTGAGAGAGATCGGCGATAAATACGGCATCAGTCGGGAACGAGTGCGCCAAATCGAAGAGCGAGTGAAGAAGAAACTCAAGACTTATCTGAATAAGGAGCTTAAGGACGTGATCGATGTTTCCCGTCCGCAGTAA
PROTEIN sequence
Length: 321
MSEDDKSTPLDFALPEIGLPKFVEEDDGETRPKNRALVPFDPLQRYLTEIRRFPLLSREEEHQLAVQYKEYGNIEAAYKLVTSNLRLVVMIAREYQKAFKNLLDLIQEGNMGLMEAIKNFDPYRGVRFPSYAVWWIRAYMIRYIMNDWRMVKIGTTQAQRKLFFNLQKEKDRIEAEGLTPGPKLLAERLNVKEDEVVEMQQRLGSRDLSVDIPIGEDDEATLLNFLQDNKQTPEEQFAETQYRDLLRHKMDQFAKGLKDKELVIYRERLLNEDPLTLREIGDKYGISRERVRQIEERVKKKLKTYLNKELKDVIDVSRPQ*