ggKbase home page

PLM1_100_b1_sep16_scaffold_1365_13

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(10313..10504)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 61.0
  • Bit_score: 91
  • Evalue 2.00e-16
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 60.0
  • Bit_score: 85
  • Evalue 3.10e-15
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 64.0
  • Bit_score: 96
  • Evalue 8.80e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
ATGTCGCGTATTACCGTTGAAGATTGCTTAGAAAAAGTTGACAACCGGTTTGAGTTGGTCATGCTGGCATCGAAGCGGGCAAAACAACTTTTCAAAGGGGCCAAGCCTCTCATCGACTCCGATAACCGCAAGGTCGTAGCGCTACGGGAAATCGCCGACGGTAAAGTAAAAAAAGTTCCAAAATCAGTCTAG
PROTEIN sequence
Length: 64
MSRITVEDCLEKVDNRFELVMLASKRAKQLFKGAKPLIDSDNRKVVALREIADGKVKKVPKSV*