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PLM1_100_b1_sep16_scaffold_104

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Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_104_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..349)
DNA (348bp) protein (116aa)
4-aminobutyrate aminotransferase (Fragment) Tax=mine drainage metagenome RepID=T1B6I7_9ZZZZ
4-aminobutyrate aminotransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(436..579)
DNA (144bp) protein (48aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KMN9_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

754..1137
DNA (384bp) protein (128aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_104_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1178..1363
DNA (186bp) protein (62aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000365CFE8
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1350..2558
DNA (1209bp) protein (403aa)
phosphopyruvate hydratase (EC:4.2.1.11)
Enolase Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAX7_ACIB4
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2560..3180
DNA (621bp) protein (207aa)
30S ribosomal protein S2 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360F358
rps2P; 30S ribosomal protein S2
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3189..4007
DNA (819bp) protein (273aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000373429C
putative dioxygenase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4116..4496
DNA (381bp) protein (127aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D55A8
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4576..5910
DNA (1335bp) protein (445aa)
Membrane metalloprotease Tax=mine drainage metagenome RepID=T1AYU3_9ZZZZ
putative membrane-associated Zn-dependent protease
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5907..6602)
DNA (696bp) protein (232aa)
Circadian clock protein, KaiC Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6674..7003)
DNA (330bp) protein (110aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_104_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7049..7903)
DNA (855bp) protein (285aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI00037CC798
N-acetyltransferase GCN5
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7873..8073)
DNA (201bp) protein (67aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_14

Not on your lists

8622..9356
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM90931.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM1_100_b1_sep16_scaffold_104_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9322..11082)
DNA (1761bp) protein (587aa)
Probable translation initiation factor IF-2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDE8_ACIB4
translation initiation factor aIF-2
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_104_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11138..11593)
DNA (456bp) protein (152aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGY9_ARCPA
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11598..12209)
DNA (612bp) protein (204aa)
50S ribosomal protein L24e Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RL24E_ARCFU
Ribosomal protein L24E
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(12217..12429)
DNA (213bp) protein (71aa)
Ribosomal protein S28e Tax=mine drainage metagenome RepID=T1CGJ7_9ZZZZ
rps28e; 30S ribosomal protein S28e
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(12442..12813)
DNA (372bp) protein (124aa)
50S ribosomal protein L7Ae Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TCL4_9EURY
rpl7ae; 50S ribosomal protein L7Ae
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_20
unknown

Not on your lists

12985..13536
DNA (552bp) protein (184aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_104_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13718..14551)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C4462
putative amidohydrolase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_22
unknown

Not on your lists

comp(14548..14865)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_104_trna_1
unknown

Not on your lists

14948..15020
DNA (73bp)
transferRNA Glu
PLM1_100_b1_sep16_scaffold_104_23
RLO_PLX_64_10, Bacteria

Not on your lists

comp(15225..16190)
DNA (966bp) protein (322aa)
hypothetical protein Tax=Paenibacillus terrigena RepID=UPI00036E7B67
alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_100_b1_sep16_scaffold_104_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16375..16968)
DNA (594bp) protein (198aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037A1ABC
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_104_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17389..19920
DNA (2532bp) protein (844aa)
UPF0051 protein Rv1461/MT1508 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19949..20725
DNA (777bp) protein (259aa)
FeS assembly ATPase SufC (EC:3.6.3.27); K09013 Fe-S cluster assembly ATP-binding protein bin=bin9_gal15 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
sufC; FeS assembly ATPase SufC
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

20741..22087
DNA (1347bp) protein (449aa)
SufD, needed for fhuF Fe-S center production/stability bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
sufD; sufD, needed for fhuF Fe-S center production/stability
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

22143..22583
DNA (441bp) protein (147aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Modular FeS cluster scaffolding protein NifU
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_104_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

22666..23913
DNA (1248bp) protein (416aa)
Cysteine desulfurase, SufS subfamily Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCT7_THET1
SufS subfamily cysteine desulfurase
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 152 in total

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