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PLM1_100_b1_sep16_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_116_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2..352
DNA (351bp) protein (117aa)
saccharopine dehydrogenase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
saccharopine dehydrogenase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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355..1662
DNA (1308bp) protein (436aa)
4-aminobutyrate aminotransferase Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XSR3_DESMR
gabT; 4-aminobutyrate aminotransferase
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_116_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1673..3118)
DNA (1446bp) protein (482aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Aminotransferase class III Tax=haloarchaeon 3A1_DGR RepID=T0TY43_9EURY
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_4
unknown

Not on your lists

comp(3358..3615)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_116_5
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3720..5084)
DNA (1365bp) protein (455aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK33_RHOMR
Tax=CG_Delta_03
PLM1_100_b1_sep16_scaffold_116_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5199..5666
DNA (468bp) protein (156aa)
OsmC-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUZ2_KORVE
OsmC-like protein
OsmC-like protein {ECO:0000313|EMBL:ABF39308.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM1_100_b1_sep16_scaffold_116_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5680..6993)
DNA (1314bp) protein (438aa)
FAD dependent oxidoreductase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
FAD dependent oxidoreductase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7056..8156)
DNA (1101bp) protein (367aa)
Malate/L-lactate dehydrogenase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEH6_THET1
malate/L-lactate dehydrogenase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8323..10509)
DNA (2187bp) protein (729aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10670..11056
DNA (387bp) protein (129aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_116_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11059..12111)
DNA (1053bp) protein (351aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_116_12
unknown

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12162..12305
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_116_13
unknown

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12309..12563
DNA (255bp) protein (85aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_116_14
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(12564..13076)
DNA (513bp) protein (171aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cytochrome oxidase assembly domain protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM1_100_b1_sep16_scaffold_116_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13073..14707)
DNA (1635bp) protein (545aa)
Cytochrome c oxidase subunit I bin=GWC2_Chloroflexi_73_18 species=Rhodococcus qingshengii genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cytochrome c oxidase subunit I
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_116_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14783..15097)
DNA (315bp) protein (105aa)
Caa(3)-type oxidase, subunit IV Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEB7_ANADF
caa(3)-type oxidase, subunit IV
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_116_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15113..15934)
DNA (822bp) protein (274aa)
hypothetical protein Tax=unclassified candidate division pSL4 RepID=UPI0003758259
cytochrome c oxidase subunit III family protein
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_116_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16042..17538
DNA (1497bp) protein (499aa)
Cytochrome c oxidase subunit 2 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NMV1_MARHT
cytochrome c oxidase subunit II
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_116_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17615..19321
DNA (1707bp) protein (569aa)
hypothetical protein Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI000379BBEA
succinate dehydrogenase subunit A
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_116_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19321..20079
DNA (759bp) protein (253aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

20084..20488
DNA (405bp) protein (135aa)
Fumarate reductase, subunit C Tax=Psychromonas ingrahamii (strain 37) RepID=A1SZQ2_PSYIN
fumarate reductase subunit C
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

20488..20901
DNA (414bp) protein (138aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20904..21161)
DNA (258bp) protein (86aa)
Translation elongation factor-like protein Tax=Dehalococcoides mccartyi RepID=D2BID7_DEHSV bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation elongation factor-like protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(21203..21547)
DNA (345bp) protein (115aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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21556..21888
DNA (333bp) protein (111aa)
Small nuclear ribonucleoprotein Tax=Methanomassiliicoccus RepID=U5Q212_9EURY
Like-Sm ribonucleoprotein core
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

21944..22951
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036033DF
nucleotidyltransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_116_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

22948..24306
DNA (1359bp) protein (453aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucomutase/phosphomannomutase, C-terminal domain family Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFH1_ACIB4
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_116_28
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(24329..25102)
DNA (774bp) protein (258aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003766F4D
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_116_29
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(25139..26188)
DNA (1050bp) protein (350aa)
Flap endonuclease 1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ0_ACIS0
flap structure-specific endonuclease
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_116_30
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(26285..33445)
DNA (7161bp) protein (2387aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EC543
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 40 in total

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