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PLM1_100_b1_sep16_scaffold_213

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_213_30
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(29168..30400)
DNA (1233bp) protein (411aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003630E07
Xylose isomerase domain protein TIM barrel
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_31
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


30595..30957
DNA (363bp) protein (121aa)
50S ribosomal protein L18e Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6F0_METTP
50S ribosomal protein L18e
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_32
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


30954..31373
DNA (420bp) protein (140aa)
50S ribosomal protein L13 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T6E8_9EURY
50S Ribosomal protein L13A
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_33
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


31370..31768
DNA (399bp) protein (133aa)
30S ribosomal protein S9 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBF7_ACIB4
30S ribosomal protein S9
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_213_34
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


31773..31964
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=RPON_SULTO
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_trna_1
unknown

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32006..32078
DNA (73bp)
transferRNA Pro
PLM1_100_b1_sep16_scaffold_213_35
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

32524..33135
DNA (612bp) protein (204aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM1_100_b1_sep16_scaffold_213_36
unknown

Not on your lists

33152..33970
DNA (819bp) protein (273aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_37
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(33920..34684)
DNA (765bp) protein (255aa)
SAM-dependent methyltransferase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
SAM-dependent methyltransferase
Tax=CG_Arma_02
PLM1_100_b1_sep16_scaffold_213_38
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

34842..35096
DNA (255bp) protein (85aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_39
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35147..35881)
DNA (735bp) protein (245aa)
2-dehydro-3-deoxygalactonate kinase Tax=Rhizobium loti (strain MAFF303099) RepID=Q98DE3_RHILO
2-dehydro-3-deoxygalactonokinase
2-dehydro-3-deoxygalactonate kinase {ECO:0000313|EMBL:BAB51328.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
PLM1_100_b1_sep16_scaffold_213_40
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

36157..36711
DNA (555bp) protein (185aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_213_41
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(36725..37066)
DNA (342bp) protein (114aa)
Aldo/keto reductase Tax=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) RepID=B1YB04_PYRNV
aldo/keto reductase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_42
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

37796..38032
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_43
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(38102..38548)
DNA (447bp) protein (149aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000369691A
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_44
unknown

Not on your lists

comp(38552..38686)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_45
unknown

Not on your lists

38811..38969
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_46
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39112..39513
DNA (402bp) protein (134aa)
Transposase, IS493 family {ECO:0000313|EMBL:EYF04988.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
PLM1_100_b1_sep16_scaffold_213_47
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

39670..39885
DNA (216bp) protein (72aa)
Small nuclear ribonucleoprotein Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4A5_9EURY
small nuclear ribonucleoprotein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_48
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

39896..40063
DNA (168bp) protein (56aa)
50S ribosomal protein L37e Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BFG0_9EURY
LSU ribosomal protein L37E
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_49
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

40190..41665
DNA (1476bp) protein (492aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B7881
amidophosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_trna_2
unknown

Not on your lists

41715..41787
DNA (73bp)
transferRNA Ala
PLM1_100_b1_sep16_scaffold_213_50
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

41868..42764
DNA (897bp) protein (299aa)
Putative uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
alpha/beta hydrolase fold protein
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM1_100_b1_sep16_scaffold_213_51
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

42806..43174
DNA (369bp) protein (123aa)
Nitrogenase subunit NifH (ATPase)-like protein (Fragment) Tax=mine drainage metagenome RepID=T0Z1G0_9ZZZZ
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
Displaying items 31-54 of 54 in total

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