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PLM1_100_b1_sep16_scaffold_213

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_213_1
unknown

Not on your lists

comp(2..1135)
DNA (1134bp) protein (378aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_2
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1339..1611)
DNA (273bp) protein (91aa)
Type I restriction enzyme R protein N terminal domain protein Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICQ9_ACIB4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM1_100_b1_sep16_scaffold_213_3
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2649..3710
DNA (1062bp) protein (354aa)
Transcriptional regulator Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQR6_MYXFH
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEI67980.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM1_100_b1_sep16_scaffold_213_4
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3791..6223
DNA (2433bp) protein (811aa)
Kelch repeat protein Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I4E2_CLOCE
Kelch repeat-containing protein
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM1_100_b1_sep16_scaffold_213_5
unknown

Not on your lists

comp(6204..7124)
DNA (921bp) protein (307aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_6
unknown

Not on your lists

comp(7270..7944)
DNA (675bp) protein (225aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_trna_3
unknown

Not on your lists

comp(8282..8387)
DNA (106bp)
transferRNA Lys
PLM1_100_b1_sep16_scaffold_213_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8435..8914)
DNA (480bp) protein (160aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_213_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(8919..11840)
DNA (2922bp) protein (974aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IB21_METCZ
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_213_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12110..12490
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6W4_9EURY
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_213_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

12657..13430
DNA (774bp) protein (258aa)
cell division protein FtsZ; K03531 cell division protein FtsZ bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_213_11
unknown

Not on your lists

13533..13706
DNA (174bp) protein (58aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

14031..14915
DNA (885bp) protein (295aa)
GTP cyclohydrolase MptA Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HHI6_ACIS0
TIGR00294 family protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_213_13
unknown

Not on your lists

15094..15249
DNA (156bp) protein (52aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_14
unknown

Not on your lists

15290..15505
DNA (216bp) protein (72aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_213_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15562..16053)
DNA (492bp) protein (164aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003629E4A
Tetratricopeptide repeat protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_213_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(16200..16436)
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


comp(16511..18046)
DNA (1536bp) protein (512aa)
pheS; phenylalanyl-tRNA ligase subunit alpha (EC:6.1.1.20)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000368930D
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_213_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

18142..18897
DNA (756bp) protein (252aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MG79_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_213_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18890..20074
DNA (1185bp) protein (395aa)
Small GTP-binding protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ28_ARCVS
small GTP-binding protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_213_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20075..20458
DNA (384bp) protein (128aa)
Roadblock/LC7 family protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Roadblock/LC7 family protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_213_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20466..21191
DNA (726bp) protein (242aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_213_22
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

21200..22834
DNA (1635bp) protein (545aa)
Circadian clock protein, KaiC Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_213_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

22845..23585
DNA (741bp) protein (247aa)
Circadian clock protein, KaiC Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
circadian clock protein KaiC
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_213_24
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

23590..24114
DNA (525bp) protein (175aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_213_25
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

24243..25880
DNA (1638bp) protein (546aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_213_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

25870..26583
DNA (714bp) protein (238aa)
Circadian clock protein, KaiC Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
circadian clock protein, KaiC
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_213_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

26656..26892
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_213_28
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(26959..28083)
DNA (1125bp) protein (375aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EDE49
Tryptophanyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_213_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(28623..29171)
DNA (549bp) protein (183aa)
3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase) (PHI) Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8B8_9EURY
3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase) (PHI)
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 54 in total

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