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PLM1_100_b1_sep16_scaffold_1908

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1908_1
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..225
DNA (225bp) protein (75aa)
glycyl-tRNA ligase (EC:6.1.1.14)
Glycyl-tRNA ligase {ECO:0000313|EMBL:AGN01066.1}; EC=6.1.1.14 {ECO:0000313|EMBL:AGN01066.1};; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
Glycyl-tRNA ligase Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VXS8_9EURY
PLM1_100_b1_sep16_scaffold_1908_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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430..1317
DNA (888bp) protein (296aa)
membrane protein Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483DA9
ompA; outer membrane protein A
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_1908_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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1387..2031
DNA (645bp) protein (215aa)
membrane protein Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483DA9
ompA; outer membrane protein A
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_1908_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2129..4300
DNA (2172bp) protein (724aa)
conserved repeat domain
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_1908_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4357..5178
DNA (822bp) protein (274aa)
Putative Ras family protein Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_1908_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5196..6563)
DNA (1368bp) protein (456aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035DC563
histone acetyltransferase, ELP3 family
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_1908_7
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(6560..6871)
DNA (312bp) protein (104aa)
Transcriptional regulator of sugar metabolism Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U2Y1_9EURY
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:EMR73285.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
PLM1_100_b1_sep16_scaffold_1908_8
unknown

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6968..7177
DNA (210bp) protein (70aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1908_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7174..7449)
DNA (276bp) protein (92aa)
Putative uncharacterized protein Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TAK5_ACIB4
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_1908_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(7456..7914)
DNA (459bp) protein (153aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036BE102
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_1908_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7998..8828)
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C210_SPHTD
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_1908_12
unknown

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9005..9604
DNA (600bp) protein (200aa)
hypothetical protein
PLM1_100_b1_sep16_scaffold_1908_13
unknown

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comp(9679..9843)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1908_14
AR6, Pacearchaeaota, DPANN, Archaea

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comp(9989..10345)
DNA (357bp) protein (119aa)
Tax=AR6
PLM1_100_b1_sep16_scaffold_1908_trna_1
unknown

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comp(10375..10459)
DNA (85bp)
transferRNA Leu
PLM1_100_b1_sep16_scaffold_1908_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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10558..10935
DNA (378bp) protein (126aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_1908_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10937..11884)
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU58_9EURY
NAD-dependent epimerase/dehydratase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_1908_17
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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12775..13188
DNA (414bp) protein (138aa)
Transposase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XS0_METBU
transposase
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM1_100_b1_sep16_scaffold_1908_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13249..14403
DNA (1155bp) protein (385aa)
acyl-CoA dehydrogenase Tax=Salsuginibacillus kocurii RepID=UPI00036797F5
acyl-CoA dehydrogenase
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_1908_19
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists

comp(14410..15021)
DNA (612bp) protein (204aa)
Transcriptional regulatory protein, putative Tax=Pyrococcus sp. (strain NA2) RepID=F4HMD8_PYRSN
transcriptional regulatory protein
Tax=RBG_13_Euryarchaeota_61_15_curated
PLM1_100_b1_sep16_scaffold_1908_20
unknown

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15244..15525
DNA (282bp) protein (94aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1908_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(15522..16373)
DNA (852bp) protein (284aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003672EEF
putative Na+-dependent transporter
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_1908_22
unknown

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comp(16427..17143)
DNA (717bp) protein (239aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1908_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(17156..17476)
DNA (321bp) protein (107aa)
Acetyl-CoA C-acetyltransferase Tax=Segniliparus rugosus ATCC BAA-974 RepID=U1M1X3_9ACTO
paaJ-2; acetyl-CoA acetyltransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_1908_24
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17503..18309
DNA (807bp) protein (269aa)
hypothetical protein Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B7860B
Uncharacterized protein {ECO:0000313|EMBL:EWS64523.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
PLM1_100_b1_sep16_scaffold_1908_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(18359..18835)
DNA (477bp) protein (159aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_1908_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18925..20106
DNA (1182bp) protein (394aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=Firmicutes bacterium CAG:555 RepID=R5CTB3_9FIRM
acyl-CoA transferase/carnitine dehydratase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_1908_27
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(20113..21486)
DNA (1374bp) protein (458aa)
3-hydroxyacyl-CoA dehydrogenase /Enoyl-CoA hydratase Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BMC3_9EURY
3-hydroxyacyl-CoA dehydrogenase/Enoyl-CoA hydratase
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 28 items

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