ggKbase home page

PLM1_100_b1_sep16_scaffold_633_20

Organism: PLM1_100_b1_sep16_Euryarchaeota_67_8

near complete RP 35 / 55 MC: 4 BSCG 21 / 51 ASCG 38 / 38 MC: 2
Location: 15930..16151

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein, contains TRAM domain Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZJ4_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 68.0
  • Bit_score: 87
  • Evalue 3.40e-15
putative RNA-binding protein, contains TRAM domain similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 68.0
  • Bit_score: 87
  • Evalue 9.60e-16
Tax=RBG_16_Euryarchaeota_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 71.0
  • Bit_score: 126
  • Evalue 1.20e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_68_12_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 222
ATGTCGCAGTTCGGGTCGGGCTTCCGGCCGCCGGCCGCCCCCGTCGAGGAAGGCAAGGTCTACGAGGCGAAGATCGAGGACATGGGCCGCGAGGGGGATGGCCTGTGCCGGGTCGCGAACTTCGTCGTGTTCATCCCCGGCACGAAGGTCGGAGACCAGGTGAAGTTCAAGGTGACGAAGGTCCTCCGCCGCGTGGCGTTCGGCGAGGTCGTCCACGAGTAG
PROTEIN sequence
Length: 74
MSQFGSGFRPPAAPVEEGKVYEAKIEDMGREGDGLCRVANFVVFIPGTKVGDQVKFKVTKVLRRVAFGEVVHE*