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PLM1_100_b1_sep16_scaffold_104_90

Organism: PLM1_100_b1_sep16_Euryarchaeota_67_8

near complete RP 35 / 55 MC: 4 BSCG 21 / 51 ASCG 38 / 38 MC: 2
Location: 79127..79690

Top 3 Functional Annotations

Value Algorithm Source
Similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) {ECO:0000313|EMBL:JAE45256.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Arundinoideae; Arundineae; Arundo.;" source="Arundo donax (Giant reed) (Donax arundinaceus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 84.0
  • Bit_score: 57
  • Evalue 2.30e-05

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Taxonomy

Arundo donax → Arundo → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 564
ATGTCGTGGTTGTACGACTGGACGTGGATCGGCACCGTGAGCTCGCGGGCCGCCTCCACGGGGACGCCGACCTCGTTGATCGACAGGACGGGGTCCGGGCTAATCACCGTGCGCGCGCTGAAGTTCACCCGCTTCCCGCTGAGGTTCGACCGGAACCGGCCCTCCTTGCCCTTCAGCCGCTGGACGAGGGTCTTGAGGGGCCGCCCGGACCGGTGGCGGGCGGGCGGGATCCCGCTGGTCTGGTTGTCGAAGTACGTCGTCACGTGGTACTGCAGCAGCTCCCACAGGTCCTCCACGATCAGCTGCGGGGCCCCCGCGTCCCGGTTCTCCCGCAGGCGCTGGTTGATCCGGAGCACGTCGACGAGCTTGTGGGTCAGGTCGTCCTCGGACCGGTCCCCGCTCTCGAGGGTGATCGAGGGGCGGACCGTGACGGGCGGCACGAGGAGGGCCGTGAGGACCATCCACTCCGGCCGCGCGACGTCTGGGTTGATCCCGAGGACCCGGAGGTCCCCGTTCGGGATCCGCTCGAGCCGCTCCCGCACCTCCTTCGGGGTGAGCTTGTGA
PROTEIN sequence
Length: 188
MSWLYDWTWIGTVSSRAASTGTPTSLIDRTGSGLITVRALKFTRFPLRFDRNRPSLPFSRWTRVLRGRPDRWRAGGIPLVWLSKYVVTWYCSSSHRSSTISCGAPASRFSRRRWLIRSTSTSLWVRSSSDRSPLSRVIEGRTVTGGTRRAVRTIHSGRATSGLIPRTRRSPFGIRSSRSRTSFGVSL*