ggKbase home page

PLM1_100_b1_sep16_scaffold_5721

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_5721_1
unknown

Not on your lists

3..173
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_5721_trna_1
unknown

Not on your lists

196..279
-----------------
DNA (84bp)
transferRNA Leu
PLM1_100_b1_sep16_scaffold_5721_2
unknown

Not on your lists

comp(310..792)
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_5721_3
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

879..1415
-----------------
DNA (537bp)
protein (179aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. CCB_US3_UF1.;"
Ribonuclease Y Tax=Thermus sp. CCB_US3_UF1 RepID=G8NAR8_9DEIN
2',3'-cyclic-nucleotide 2'-phosphodiesterase
PLM1_100_b1_sep16_scaffold_5721_4
unknown

Not on your lists

1528..2469
-----------------
DNA (942bp)
protein (314aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_5721_5
unknown

Not on your lists

2500..2856
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_5721_6
unknown

Not on your lists

2853..3224
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_5721_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3225..3950)
-----------------
DNA (726bp)
protein (242aa)
cld2; chlorite dismutase (EC:1.13.11.49)
Chlorite dismutase {ECO:0000313|EMBL:CBK42777.1}; EC=1.13.11.49 {ECO:0000313|EMBL:CBK42777.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Chlorite dismutase Tax=Candidatus Nitrospira defluvii RepID=D8PHP0_9BACT
PLM1_100_b1_sep16_scaffold_5721_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4020..4649)
-----------------
DNA (630bp)
protein (210aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNQ2_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:CDM66408.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_5721_9

Not on your lists

4711..5427
-----------------
DNA (717bp)
protein (239aa)
NAD-dependent protein deacetylase {ECO:0000313|EMBL:AHG52936.1}; EC=3.5.1.- {ECO:0000313|EMBL:AHG52936.1};; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Silent information regulator protein Sir2 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F115_CONWI
silent information regulator protein Sir2
PLM1_100_b1_sep16_scaffold_5721_10
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5424..5612
-----------------
DNA (189bp)
protein (63aa)
UvrABC system protein C Tax=Pseudanabaena sp. PCC 7367 RepID=K9SJX1_9CYAN
excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
Displaying 11 items

View Taxonomy