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PLM1_100_b1_sep16_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 217 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_6_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1..510
DNA (510bp) protein (170aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI00035CEFBB
Uncharacterized protein {ECO:0000313|EMBL:ETK33388.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_6_2
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

524..1354
DNA (831bp) protein (277aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI000362474D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD43867.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_6_3
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1405..3402
DNA (1998bp) protein (666aa)
Putative plasmid replication initiator protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TDY4_MICAI
putative plasmid replication initiator protein
Putative plasmid replication initiator protein {ECO:0000313|EMBL:ADL48867.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_6_4
unknown

Not on your lists

3500..3667
DNA (168bp) protein (56aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6_5
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3667..3861
DNA (195bp) protein (65aa)
Predicted protein Tax=Streptomyces sp. AA4 RepID=D9UZ57_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL04433.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
MerR family regulatory protein
PLM1_100_b1_sep16_scaffold_6_6
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3881..4513
DNA (633bp) protein (211aa)
Integrase family protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS52_KRIFD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADB31176.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_6_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4480..5046
DNA (567bp) protein (189aa)
Integrase family protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS52_KRIFD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADB31176.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_6_trna_3
unknown

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comp(5096..5176)
DNA (81bp)
transferRNA Asn
PLM1_100_b1_sep16_scaffold_6_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5329..5649
DNA (321bp) protein (107aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RNN4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80489.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_6_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5646..7037)
DNA (1392bp) protein (464aa)
D-xylulose kinase Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MU05_SACVD
D-xylulose kinase {ECO:0000313|EMBL:EXG80482.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
D-xylulose kinase
PLM1_100_b1_sep16_scaffold_6_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7066..7596)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035ED56E
Uncharacterized protein {ECO:0000313|EMBL:EXG80474.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_6_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7597..10446)
DNA (2850bp) protein (950aa)
DNA primase Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SI22_NOCSJ
DNA primase {ECO:0000313|EMBL:ABL81457.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
DNA primase
PLM1_100_b1_sep16_scaffold_6_12
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10539..11063)
DNA (525bp) protein (175aa)
Putative uncharacterized protein Tax=Ralstonia solanacearum K60-1 RepID=H5W9H7_RALSL
Putative uncharacterized protein {ECO:0000313|EMBL:CCF96448.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_6_13
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11069..12298)
DNA (1230bp) protein (410aa)
Ferredoxin reductase Tax=Streptomyces sp. Mg1 RepID=B4V114_9ACTO
Ferredoxin reductase {ECO:0000313|EMBL:EDX21651.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
PLM1_100_b1_sep16_scaffold_6_14
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12320..13558)
DNA (1239bp) protein (413aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA29_9ACTO
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
putative deoxyguanosinetriphosphate triphosphohydrolase
PLM1_100_b1_sep16_scaffold_6_15
unknown

Not on your lists

13754..13978
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6_16
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13981..14349)
DNA (369bp) protein (123aa)
Cupin 2 conserved barrel domain protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9T0_GEOOG
Cupin 2 barrel domain-containing protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB73793.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_100_b1_sep16_scaffold_6_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14373..17078)
DNA (2706bp) protein (902aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:EXG80465.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EXG80465.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Pyruvate, phosphate dikinase (EC:2.7.9.1)
pyruvate phosphate dikinase Tax=Longispora albida RepID=UPI00037AB27C
PLM1_100_b1_sep16_scaffold_6_18
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17240..17917)
DNA (678bp) protein (226aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00037D2A73
Uncharacterized protein {ECO:0000313|EMBL:KDN84486.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_6_19
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17994..20699
DNA (2706bp) protein (902aa)
Extracellular solute-binding protein family 5 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TDK8_MICAI
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EXG80464.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
family 5 extracellular solute-binding protein
PLM1_100_b1_sep16_scaffold_6_20
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20786..22396
DNA (1611bp) protein (537aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034B9630
tyrosine protein kinase:Serine/threonine protein kinase
Tyrosine protein kinase:Serine/threonine protein kinase {ECO:0000313|EMBL:AAZ56262.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
PLM1_100_b1_sep16_scaffold_6_21
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22447..23595)
DNA (1149bp) protein (383aa)
hypothetical protein Tax=Longispora albida RepID=UPI000367514A
Putative TIM-barrel protein, nifR3 family {ECO:0000313|EMBL:EXG80462.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_6_22
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23711..24592
DNA (882bp) protein (294aa)
hypothetical protein Tax=Nocardiopsis lucentensis RepID=UPI000348D535
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADB75768.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_100_b1_sep16_scaffold_6_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24681..25637)
DNA (957bp) protein (319aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI00037E0AC3
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:EXG80457.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_6_24
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25677..26210)
DNA (534bp) protein (178aa)
Acarbose-7-kinase ScatK Tax=Streptomyces coelicoflavus ZG0656 RepID=H1Q812_9ACTO
Acarbose-7-kinase ScatK {ECO:0000313|EMBL:EHN79461.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
PfkB domain-containing protein
PLM1_100_b1_sep16_scaffold_6_25
unknown

Not on your lists

26315..26647
DNA (333bp) protein (111aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6_26
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26658..27707
DNA (1050bp) protein (350aa)
Putative Aminoglycoside phosphotransferase {ECO:0000313|EMBL:CCI53712.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
phosphotransferase enzyme family protein
PLM1_100_b1_sep16_scaffold_6_27
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28439..28969
DNA (531bp) protein (177aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000360890D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46710.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_6_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(29089..30471)
DNA (1383bp) protein (461aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase Tax=Thermobifida fusca RepID=SYG_THEFY
PLM1_100_b1_sep16_scaffold_6_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30567..31307)
DNA (741bp) protein (247aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003783592
Uncharacterized protein {ECO:0000313|EMBL:EXG80453.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
Displaying items 1-30 of 217 in total

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