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PLM1_100_b1_sep16_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_9_1
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1028)
DNA (1026bp) protein (342aa)
fahA; fumarylacetoacetase (EC:3.7.1.2)
Putative fumarylacetoacetase {ECO:0000313|EMBL:CAM03213.1}; EC=3.7.1.2 {ECO:0000313|EMBL:CAM03213.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Fumarylacetoacetase Tax=Saccharopolyspora erythraea RepID=T2RPG7_SACER
PLM1_100_b1_sep16_scaffold_9_2
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1025..1930)
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PNP1_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB30893.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_9_3
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2005..3192
DNA (1188bp) protein (396aa)
homogentisate 1,2-dioxygenase Tax=Catelliglobosispora koreensis RepID=UPI000382BF3B
homogentisate 12-dioxygenase
Homogentisate 12-dioxygenase {ECO:0000313|EMBL:ADD46083.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_9_4
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3337..4644
DNA (1308bp) protein (436aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000372CDBE
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADB30472.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_9_5
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4650..5021)
DNA (372bp) protein (124aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Micromonospora lupini str. Lupac 08 RepID=I0LEG5_9ACTO
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCH22212.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_100_b1_sep16_scaffold_9_6
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5039..5533)
DNA (495bp) protein (165aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S9D8_ACTS5
PLM1_100_b1_sep16_scaffold_9_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5565..6311)
DNA (747bp) protein (249aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Actinoplanes sp. N902-109 RepID=R4LPL4_9ACTO
ispD; 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase
PLM1_100_b1_sep16_scaffold_9_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6312..6794)
DNA (483bp) protein (161aa)
Transcriptional regulator, CarD family Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGL7_ACTMD
CarD-like transcriptional regulator {ECO:0000313|EMBL:EXG79403.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
CarD family transcriptional regulator
PLM1_100_b1_sep16_scaffold_9_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7082..7831
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:EXG79402.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_100_b1_sep16_scaffold_9_10
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7838..8872)
DNA (1035bp) protein (345aa)
naringenin-chalcone synthase (EC:2.3.1.74)
Putative naringenin-chalcone synthase Tax=Saccharomonospora azurea NA-128 RepID=H8G7R0_9PSEU
Putative naringenin-chalcone synthase {ECO:0000313|EMBL:EHY87334.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
PLM1_100_b1_sep16_scaffold_9_11
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8866..10050)
DNA (1185bp) protein (395aa)
Acyl-CoA dehydrogenase Tax=Saccharomonospora cyanea NA-134 RepID=H5XMQ8_9PSEU
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR61037.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
acyl-CoA dehydrogenase
PLM1_100_b1_sep16_scaffold_9_12
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10047..10787)
DNA (741bp) protein (247aa)
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase Tax=Saccharomonospora azurea NA-128 RepID=H8G7Q7_9PSEU
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase {ECO:0000313|EMBL:EHY87331.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
PLM1_100_b1_sep16_scaffold_9_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10955..11662
DNA (708bp) protein (236aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MVV5_SACVD
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:EXG79401.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase
PLM1_100_b1_sep16_scaffold_9_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11746..12498
DNA (753bp) protein (251aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RE08_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG79400.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_9_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12547..13911
DNA (1365bp) protein (455aa)
DNA repair protein RadA Tax=Actinoalloteichus spitiensis RepID=UPI000368E023
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
DNA repair protein RadA
PLM1_100_b1_sep16_scaffold_9_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14229..15308
DNA (1080bp) protein (360aa)
DNA integrity scanning protein DisA Tax=Longispora albida RepID=UPI00036BC908
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00207481}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
DNA integrity scanning protein DisA
PLM1_100_b1_sep16_scaffold_9_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15491..16840
DNA (1350bp) protein (450aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein Tax=Longispora albida RepID=UPI00037B57D1
two component system histidine kinase
PLM1_100_b1_sep16_scaffold_9_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16818..17510)
DNA (693bp) protein (231aa)
hypothetical protein Tax=Longispora albida RepID=UPI000367F835
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACY98901.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_9_19
unknown

Not on your lists

17533..18150
DNA (618bp) protein (206aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037C21F1
PLM1_100_b1_sep16_scaffold_9_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18359..19045)
DNA (687bp) protein (229aa)
Uncharacterized protein Tax=Gordonia malaquae NBRC 108250 RepID=M3UUK6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG79397.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_9_21
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19112..20020
DNA (909bp) protein (303aa)
A/G-specific DNA glycosylase {ECO:0000313|EMBL:EXG79396.1}; EC=3.2.2.- {ECO:0000313|EMBL:EXG79396.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
adenine glycosylase Tax=Frankia sp. Iso899 RepID=UPI0003B3CD6E
hhh-gpd family protein
PLM1_100_b1_sep16_scaffold_9_22
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20261..20851
DNA (591bp) protein (197aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037DC391
putative polysaccharide deacetylase
Putative polysaccharide deacetylase {ECO:0000313|EMBL:AGZ43420.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_9_23
unknown

Not on your lists

comp(20884..21111)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_9_24
unknown

Not on your lists

comp(21169..21303)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_9_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21501..24026)
DNA (2526bp) protein (842aa)
ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDL4_9ACTO
ATPase with chaperone activity, ATP-binding subunit {ECO:0000313|EMBL:EXG79395.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ATPase aaa-2 domain-containing protein
PLM1_100_b1_sep16_scaffold_9_26
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24319..24657)
DNA (339bp) protein (113aa)
Lsr2 Tax=Saccharomonospora glauca K62 RepID=I1D1M8_9PSEU
Lsr2 family protein {ECO:0000313|EMBL:EXG79394.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_9_27
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25368..26138
DNA (771bp) protein (257aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S239_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV83502.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_100_b1_sep16_scaffold_9_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26146..26904)
DNA (759bp) protein (253aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
transcriptional activator (EC:2.7.1.33)
pantothenate kinase Tax=Catelliglobosispora koreensis RepID=UPI00037B1933
PLM1_100_b1_sep16_scaffold_9_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26905..27750)
DNA (846bp) protein (282aa)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) {ECO:0000313|EMBL:EXG79390.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EXG79390.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Putative quinolinate phosphoribosyltransferase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WBK2_9ACTO
putative quinolinate phosphoribosyltransferase
PLM1_100_b1_sep16_scaffold_9_30
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27747..29411)
DNA (1665bp) protein (555aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Putative L-aspartate oxidase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HJ07_ACTM4
nadB; putative L-aspartate oxidase
Displaying items 1-30 of 183 in total

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