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PLM1_100_b1_sep16_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_42_1
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..809)
DNA (807bp) protein (269aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000380DB0C
Putative ATPase {ECO:0000313|EMBL:EXG80940.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
AFG1-family ATPase
PLM1_100_b1_sep16_scaffold_42_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1371..2330
DNA (960bp) protein (320aa)
Glycine betaine ABC transporter substrate-binding protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W424_9ACTO
glycine betaine ABC transporter substrate-binding protein
Glycine betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGZ43884.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_42_3
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2331..3029)
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AY39_NOCDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH69917.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM1_100_b1_sep16_scaffold_42_4
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3094..4737)
DNA (1644bp) protein (548aa)
Uncharacterized protein Tax=Paenibacillus alvei A6-6i-x RepID=S9U6Y3_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:EPY10396.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei A6-6i-x.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_42_5
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4820..5476)
DNA (657bp) protein (219aa)
Putative uncharacterized protein Tax=Burkholderia sp. (strain 383) RepID=Q39LU9_BURS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99894.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_42_6
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5528..6034)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Streptomyces niveus NCIMB 11891 RepID=V6K932_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST28553.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
tRNA nucleotidyltransferase/poly(A) polymerase
PLM1_100_b1_sep16_scaffold_42_7
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6021..6572)
DNA (552bp) protein (184aa)
ATP-dependent protease HslVU (ClpYQ), peptidase subunit Tax=Frankia sp. QA3 RepID=I9KAQ0_9ACTO
hypothetical protein
ATP-dependent protease HslVU (ClpYQ), peptidase subunit {ECO:0000313|EMBL:EIV91013.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
PLM1_100_b1_sep16_scaffold_42_8
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6569..7165)
DNA (597bp) protein (199aa)
Flavoprotein Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W782_9ACTO
Flavoprotein {ECO:0000313|EMBL:EFL26693.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
flavoprotein
PLM1_100_b1_sep16_scaffold_42_9
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7165..8334)
DNA (1170bp) protein (390aa)
branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.12)
Catalytic domain-containing protein of components of various dehydrogenase complexes Tax=Streptomyces violaceusniger Tu 4113 RepID=G2PB36_STRVO
Pyruvate dehydrogenase E2 component {ECO:0000313|EMBL:EWM18091.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PLM1_100_b1_sep16_scaffold_42_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8364..9353)
DNA (990bp) protein (330aa)
Transketolase central region Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QIE7_CATAD
transketolase
Transketolase central region {ECO:0000313|EMBL:ACU75024.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_100_b1_sep16_scaffold_42_11
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9350..10447)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037E3B72
Pyruvate dehydrogenase {ECO:0000313|EMBL:KFG01736.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
pdhA; pyruvate dehydrogenase E1 protein subunit alpha
PLM1_100_b1_sep16_scaffold_42_12
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10586..11047
DNA (462bp) protein (154aa)
AsnC family transcriptional regulator Tax=Streptomyces albulus CCRC 11814 RepID=S0HPC5_STRA9
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AIA04641.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus.;"
PLM1_100_b1_sep16_scaffold_42_13
unknown

Not on your lists

comp(11053..11223)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_42_14
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11366..12100
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FEY5_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB43697.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_42_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12239..13297
DNA (1059bp) protein (353aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003631D01
ATP-dependent DNA ligase {ECO:0000313|EMBL:EXG80938.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ATP dependent DNA ligase
PLM1_100_b1_sep16_scaffold_42_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13294..14823
DNA (1530bp) protein (510aa)
TAP domain-containing protein Tax=Actinoplanes sp. N902-109 RepID=R4LWT9_9ACTO
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EXG80937.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
TAP domain-containing protein
PLM1_100_b1_sep16_scaffold_42_17
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14832..15473)
DNA (642bp) protein (214aa)
Phosphoribosyltransferase Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HD82_STRPR
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AIS01372.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM1_100_b1_sep16_scaffold_42_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15470..16495)
DNA (1026bp) protein (342aa)
ATP-dependent DNA ligase Tax=Frankia sp. Iso899 RepID=UPI0003B4429E
DNA polymerase LigD, polymerase domain {ECO:0000313|EMBL:EXG80935.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_42_19
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16664..17959
DNA (1296bp) protein (432aa)
Putative cyclopropane fatty acid synthase Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JW92_STREN
cyclopropane fatty acid synthase
Putative cyclopropane fatty acid synthase {ECO:0000313|EMBL:AEW94461.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_100_b1_sep16_scaffold_42_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18225..20594
DNA (2370bp) protein (790aa)
Endonuclease/exonuclease/phosphatase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PNW1_KRIFD
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AHH97052.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_42_21
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20658..21059
DNA (402bp) protein (134aa)
msrB; peptide methionine sulfoxide reductase msrB (EC:1.8.4.12)
Peptide methionine sulfoxide reductase msrB {ECO:0000313|EMBL:CCG04140.1}; EC=1.8.4.12 {ECO:0000313|EMBL:CCG04140.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Peptide methionine sulfoxide reductase msrB Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RR60_BLASD
PLM1_100_b1_sep16_scaffold_42_22
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21168..21338)
DNA (171bp) protein (57aa)
XRE family transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B65CE1
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEH10478.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_100_b1_sep16_scaffold_42_23
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21501..22238
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JZL7_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00962.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_42_24
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22229..22522
DNA (294bp) protein (98aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037BB7CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00962.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_42_25
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22519..23217
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JYF1_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH29734.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_100_b1_sep16_scaffold_42_26
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23214..24128
DNA (915bp) protein (305aa)
Putative secreted protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JQN4_SACES
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:CCH29735.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_100_b1_sep16_scaffold_42_27
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24128..24526
DNA (399bp) protein (133aa)
Putative permease Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H7U6_ACTM4
putative permease
Putative permease {ECO:0000313|EMBL:BAL89083.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_100_b1_sep16_scaffold_42_28
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24701..25648
DNA (948bp) protein (316aa)
Aminoglycoside phosphotransferase Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BWD3_BEUC1
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACQ78591.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM1_100_b1_sep16_scaffold_42_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25652..26359)
DNA (708bp) protein (236aa)
Putative chlorite dismutase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W816_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80931.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative chlorite dismutase
PLM1_100_b1_sep16_scaffold_42_30
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26352..27764)
DNA (1413bp) protein (471aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZP6_STANL
Protoporphyrinogen oxidase {ECO:0000313|EMBL:EXG80930.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Displaying items 1-30 of 66 in total

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