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PLM1_100_b1_sep16_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_56_1
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3..704
DNA (702bp) protein (234aa)
fadD15; Long-chain-fatty-acid-CoA ligase FadD15 (EC:6.2.1.3)
Long-chain-fatty-acid-CoA ligase FadD15 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JVW2_SACES
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EXG80881.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_100_b1_sep16_scaffold_56_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

793..2367
DNA (1575bp) protein (525aa)
Integral membrane sensor signal transduction histidine kinase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1S3_VERMA
Signal transduction histidine kinase {ECO:0000313|EMBL:EXG80880.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
integral membrane sensor signal transduction histidine kinase
PLM1_100_b1_sep16_scaffold_56_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2357..3037
DNA (681bp) protein (227aa)
Two component transcriptional regulator, LuxR family Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q8S0_STANL
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EXG80879.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
LuxR family two component transcriptional regulator
PLM1_100_b1_sep16_scaffold_56_4
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3143..4264)
DNA (1122bp) protein (374aa)
Glycosyl transferase Tax=Micromonospora sp. ATCC 39149 RepID=C4RLN7_9ACTO
Glycosyl transferase {ECO:0000313|EMBL:EEP70946.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
group 1 glycosyl transferase protein
PLM1_100_b1_sep16_scaffold_56_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4261..5502)
DNA (1242bp) protein (414aa)
STE24 endopeptidase (EC:3.4.24.84)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000362405B
Zn-dependent protease with chaperone function {ECO:0000313|EMBL:EXG80877.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_100_b1_sep16_scaffold_56_6
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5686..6960)
DNA (1275bp) protein (425aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00037E8FD6
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM86583.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM1_100_b1_sep16_scaffold_56_7
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7065..8003)
DNA (939bp) protein (313aa)
NLP/P60 protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8X4_THECD
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACY98612.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_56_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8462..8680)
DNA (219bp) protein (73aa)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI00035D4833
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW11256.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_100_b1_sep16_scaffold_56_9
unknown

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8823..9203
DNA (381bp) protein (127aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_56_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9329..10672)
DNA (1344bp) protein (448aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H0W3_ACTM4
Putative RNA-binding protein containing a PIN domain {ECO:0000313|EMBL:EXG80875.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_56_11
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10669..10905)
DNA (237bp) protein (79aa)
SC6G10.11c, len: 79aa Tax=Streptomyces vitaminophilus RepID=UPI00036980F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELS52602.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
PLM1_100_b1_sep16_scaffold_56_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11093..12886
DNA (1794bp) protein (598aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VT83_9ACTO
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:EXG80874.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_56_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13169..13840
DNA (672bp) protein (224aa)
NUDIX hydrolase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1T6_VERMA
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEB46511.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_56_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13837..14736
DNA (900bp) protein (300aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035C781E
Nucleoside-diphosphate-sugar pyrophosphorylase family protein {ECO:0000313|EMBL:EXG80872.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative nucleotidyltransferase
PLM1_100_b1_sep16_scaffold_56_15
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14751..15380)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI00035FAFCD
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AHH21065.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
PLM1_100_b1_sep16_scaffold_56_16
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15377..16390)
DNA (1014bp) protein (338aa)
glutathione S-transferase (EC:2.5.1.18)
glutathione S-transferase Tax=Saccharopolyspora spinosa RepID=UPI0002379807
Glutathione S-transferase {ECO:0000313|EMBL:KEI45347.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
PLM1_100_b1_sep16_scaffold_56_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16409..16696
DNA (288bp) protein (96aa)
Transcription regulator asnc-type-like protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1T8_VERMA
transcription regulator asnc-type-like protein
Transcriptional regulator {ECO:0000313|EMBL:EXG80871.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_100_b1_sep16_scaffold_56_18
Plautia stali symbiont, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16699..17340
DNA (642bp) protein (214aa)
Phosphoglycerate mutase Tax=Plautia stali symbiont RepID=U3U0E8_9ENTR
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:BAN98269.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Plautia stali symbiont.;"
PLM1_100_b1_sep16_scaffold_56_19
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17359..18405)
DNA (1047bp) protein (349aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L944_9ACTO
PLM1_100_b1_sep16_scaffold_56_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18411..18830)
DNA (420bp) protein (140aa)
chemotaxis protein CheY Tax=Actinoalloteichus spitiensis RepID=UPI000375A2C8
Uncharacterized protein {ECO:0000313|EMBL:EXG80865.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_56_21
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18882..19853)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003637E0B
Putative membrane protein {ECO:0000313|EMBL:EXG80866.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cytochrome c oxidase caa3-type, assembly factor ctag-like protein
PLM1_100_b1_sep16_scaffold_56_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19916..20539
DNA (624bp) protein (208aa)
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1)
cytochrome B Tax=Actinoplanes globisporus RepID=UPI00036412BA
Heme/copper-type cytochrome/quinol oxidase, subunit 3 {ECO:0000313|EMBL:EXG80867.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_100_b1_sep16_scaffold_56_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20648..21433
DNA (786bp) protein (262aa)
Cytochrome c class I Tax=Micromonospora sp. ATCC 39149 RepID=C4RLQ0_9ACTO
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:EXG80868.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cytochrome c class i
PLM1_100_b1_sep16_scaffold_56_24
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21430..22530
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003705AB6
Rieske Fe-S protein {ECO:0000313|EMBL:EXG80869.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative ubiquinol-cytochrome c reductase iron-sulfur subunit
PLM1_100_b1_sep16_scaffold_56_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22527..24119
DNA (1593bp) protein (531aa)
Ubiquinol-cytochrome c reductase cytochrome b subunit Tax=Micromonospora lupini str. Lupac 08 RepID=I0L938_9ACTO
Cytochrome b subunit of the bc complex {ECO:0000313|EMBL:EXG80870.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cytochrome b/b6 domain
PLM1_100_b1_sep16_scaffold_56_26
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24329..25108
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG0_THET1
Nucleotidyltransferase family protein {ECO:0000313|EMBL:EXG80863.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_56_27
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25303..26565)
DNA (1263bp) protein (421aa)
Transposase, IS4 family Tax=Frankia sp. (strain CcI3) RepID=Q2JC88_FRASC
transposase
Transposase, IS4 family {ECO:0000313|EMBL:ABD11104.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_100_b1_sep16_scaffold_56_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26632..27048)
DNA (417bp) protein (139aa)
Cytochrome c oxidase polypeptide 4 {ECO:0000256|PIRNR:PIRNR017385}; EC=1.9.3.1 {ECO:0000256|PIRNR:PIRNR017385};; Cytochrome aa3 subunit 4 {ECO:0000256|PIRNR:PIRNR017385}; Cytochrome c oxidase polypeptide IV {ECO:0000256|PIRNR:PIRNR017385}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Cytochrome c oxidase polypeptide 4 Tax=Saccharomonospora marina XMU15 RepID=H5X1F3_9PSEU
cytochrome-c oxidase
PLM1_100_b1_sep16_scaffold_56_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27077..27955)
DNA (879bp) protein (293aa)
Cytochrome c oxidase, subunit II Tax=Micromonospora sp. (strain L5) RepID=E8S4I3_MICSL
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EXG80861.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cytochrome c oxidase subunit II
PLM1_100_b1_sep16_scaffold_56_30
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28166..29263
DNA (1098bp) protein (366aa)
Class V aminotransferase Tax=Micromonospora sp. ATCC 39149 RepID=C4RLQ7_9ACTO
Class V aminotransferase {ECO:0000313|EMBL:EEP70966.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
class V aminotransferase
Displaying items 1-30 of 63 in total

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