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PLM1_100_b1_sep16_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 239 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_72_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

693..1199
DNA (507bp) protein (169aa)
3'-5' exoribonuclease {ECO:0000256|HAMAP-Rule:MF_00977}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00977};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAB1_GEOOG
hypothetical protein
PLM1_100_b1_sep16_scaffold_72_2
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1329..2354
DNA (1026bp) protein (342aa)
phosphofructokinase (EC:2.7.1.90)
Phosphofructokinase {ECO:0000313|EMBL:ADD44687.1}; EC=2.7.1.90 {ECO:0000313|EMBL:ADD44687.1};; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
6-phosphofructokinase Tax=Longispora albida RepID=UPI0003662F57
PLM1_100_b1_sep16_scaffold_72_3
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2513..3178
DNA (666bp) protein (222aa)
TetR family transcriptional regulator Tax=Mycobacterium sp. (strain JDM601) RepID=F5YY14_MYCSD
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AEF34214.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
PLM1_100_b1_sep16_scaffold_72_4
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3175..4548
DNA (1374bp) protein (458aa)
Flavin-containing monooxygenase FMO Tax=Micromonospora lupini str. Lupac 08 RepID=I0L912_9ACTO
Flavin-containing monooxygenase FMO {ECO:0000313|EMBL:CCH20309.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
fad-dependent pyridine nucleotide-disulfide oxidoreductase
PLM1_100_b1_sep16_scaffold_72_5
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4620..5360
DNA (741bp) protein (247aa)
alpha/beta hydrolase Tax=Salinispora pacifica RepID=UPI00037EE7F9
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ADL48054.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_72_6
Gordonia namibiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5357..6184
DNA (828bp) protein (276aa)
Putative oxidoreductase Tax=Gordonia namibiensis NBRC 108229 RepID=K6WGT7_9ACTO
Putative oxidoreductase {ECO:0000313|EMBL:GAB98525.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia namibiensis NBRC 108229.;"
short-chain dehydrogenase/reductase SDR
PLM1_100_b1_sep16_scaffold_72_7
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6201..6596
DNA (396bp) protein (132aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034BF784
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46480.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_72_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6664..7989
DNA (1326bp) protein (442aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) {ECO:0000313|EMBL:CCG03051.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CCG03051.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSU8_BLASD
PLM1_100_b1_sep16_scaffold_72_9
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8012..9037
DNA (1026bp) protein (342aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase Tax=Micromonospora sp. ATCC 39149 RepID=C4RLL1_9ACTO
Threonine aldolase {ECO:0000313|EMBL:EEP70920.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM1_100_b1_sep16_scaffold_72_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9210..9689)
DNA (480bp) protein (160aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
bacterioferritin Tax=Longispora albida RepID=UPI00036D29C2
bacterioferritin
PLM1_100_b1_sep16_scaffold_72_11
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9777..9974)
DNA (198bp) protein (66aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003736623
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KHD74863.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
bfd; BFD (2Fe-2S)-binding domain-containing protein
PLM1_100_b1_sep16_scaffold_72_12

Not on your lists

comp(10155..11180)
DNA (1026bp) protein (342aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase Tax=Frankia sp. Iso899 RepID=UPI0003B48238
Putative uncharacterized protein {ECO:0000313|EMBL:ADU56095.1}; species="unclassified sequences; environmental samples.;" source="uncultured organism CA878.;"
PLM1_100_b1_sep16_scaffold_72_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11706..12578)
DNA (873bp) protein (291aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
endonuclease IV Tax=Salinispora pacifica RepID=UPI00037A5897
endonuclease
PLM1_100_b1_sep16_scaffold_72_14
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12568..14361)
DNA (1794bp) protein (598aa)
Protein kinase Tax=Micromonospora sp. ATCC 39149 RepID=C4RLK9_9ACTO
Protein kinase {ECO:0000313|EMBL:EEP70918.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
serine/threonine protein kinase with pasta sensor(s)
PLM1_100_b1_sep16_scaffold_72_15
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14722..15549
DNA (828bp) protein (276aa)
Putative uncharacterized protein bin=GWC2_Syntrophobacterales_56_13 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM1_100_b1_sep16_scaffold_72_16
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15557..15976
DNA (420bp) protein (140aa)
transcriptional regulator Tax=Streptomyces sp. MspMP-M5 RepID=UPI00035C1A32
transcriptional regulatory protein
Transcriptional regulatory protein {ECO:0000313|EMBL:AJC58981.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
PLM1_100_b1_sep16_scaffold_72_17
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15973..16302
DNA (330bp) protein (110aa)
Lycopene cyclase domain protein Tax=Frankia sp. QA3 RepID=I9AAD7_9ACTO
Lycopene cyclase domain protein {ECO:0000313|EMBL:EIV96546.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_72_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16299..16625
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LJQ6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL15470.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_100_b1_sep16_scaffold_72_19
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16552..17541)
DNA (990bp) protein (330aa)
Squalene/phytoene synthase Tax=Frankia sp. (strain EAN1pec) RepID=A8KZD4_FRASN
squalene/phytoene synthase
Squalene/phytoene synthase {ECO:0000313|EMBL:ABW14490.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_100_b1_sep16_scaffold_72_20
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17538..18992)
DNA (1455bp) protein (485aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003687C3E
Uncharacterized protein {ECO:0000313|EMBL:EWT05535.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_72_21
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19183..19407
DNA (225bp) protein (75aa)
Guanyl-specific ribonuclease St {ECO:0000313|EMBL:EXI78577.1}; EC=3.1.27.3 {ECO:0000313|EMBL:EXI78577.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI000368368C
guanine-specific ribonuclease N1 and T1
PLM1_100_b1_sep16_scaffold_72_22
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

19404..19883
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I268_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99355.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM1_100_b1_sep16_scaffold_72_23
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19948..21426)
DNA (1479bp) protein (493aa)
Phytoene desaturase Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T5F6_MICAI
phytoene desaturase
Phytoene desaturase {ECO:0000313|EMBL:ADL43811.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_72_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21522..21926)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003672816
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM1_100_b1_sep16_scaffold_72_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21961..22446
DNA (486bp) protein (162aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000372AE0F
regulatory protein MarR
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM1_100_b1_sep16_scaffold_72_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22734..23327
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQF7_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94134.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM1_100_b1_sep16_scaffold_72_27
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23394..24464)
DNA (1071bp) protein (357aa)
Polyprenyl synthetase Tax=Micromonospora sp. ATCC 39149 RepID=C4RLK7_9ACTO
Polyprenyl synthetase {ECO:0000313|EMBL:EEP70916.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
polyprenyl synthetase
PLM1_100_b1_sep16_scaffold_72_28
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24608..25528
DNA (921bp) protein (307aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003653A92
putative 5,10-methylenetetrahydrofolate reductase
PLM1_100_b1_sep16_scaffold_72_29
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25521..26153
DNA (633bp) protein (211aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037B66D9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD75403.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM1_100_b1_sep16_scaffold_72_30
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26158..26823
DNA (666bp) protein (222aa)
CDP-diacylglycerol-inositol 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-inositol 3-phosphatidyltransferase Tax=Frankia alni (strain ACN14a) RepID=Q0RNS2_FRAAA
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60845.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
Displaying items 1-30 of 239 in total

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