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PLM1_100_b1_sep16_scaffold_81

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_81_1
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..135)
DNA (135bp) protein (45aa)
RNA polymerase sigma24 factor Tax=Actinopolymorpha alba RepID=UPI0003678C00
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EPD66983.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM1_100_b1_sep16_scaffold_81_2

Not on your lists

279..887
DNA (609bp) protein (203aa)
Trp repressor binding protein Tax=uncultured bacterium esnapd16.1 RepID=S5TN25_9BACT
Trp repressor binding protein {ECO:0000313|EMBL:AGS49803.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium esnapd16.1.;"
flavoprotein WrbA
PLM1_100_b1_sep16_scaffold_81_3
Legionella hackeliae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(983..1813)
DNA (831bp) protein (277aa)
Flavin-containing monooxygenase Tax=Frankia sp. CN3 RepID=G6H2J1_9ACTO
Flavin containing monooxygenase
Flavin containing monooxygenase {ECO:0000313|EMBL:CEK11478.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella hackeliae.;"
PLM1_100_b1_sep16_scaffold_81_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1848..2588)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H2J2_9ACTO
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_81_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2623..3312)
DNA (690bp) protein (230aa)
Methyltransferase type 11 Tax=Frankia sp. CN3 RepID=G6H2J3_9ACTO
type 11 methyltransferase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_81_6
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3957..7739)
DNA (3783bp) protein (1261aa)
Peptidase S8/S53 subtilisin kexin sedolisin Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C0Q8_STRBB
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADI05780.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_100_b1_sep16_scaffold_81_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8175..10751
DNA (2577bp) protein (859aa)
LuxR family transcriptional regulator Tax=Streptomyces collinus Tu 365 RepID=S5VS64_STRCU
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EWM11463.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
LuxR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_81_8
unknown

Not on your lists

comp(11423..11779)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_81_9
unknown

Not on your lists

12095..12838
DNA (744bp) protein (248aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_81_10
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12945..14504)
DNA (1560bp) protein (520aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000367D97E
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:AEH11437.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_100_b1_sep16_scaffold_81_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(15175..16029)
DNA (855bp) protein (285aa)
oxidoreductase Tax=Frankia sp. Iso899 RepID=UPI0003B40DB0
Aldo/keto reductase {ECO:0000313|EMBL:EFH81792.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
aldo/keto reductase
PLM1_100_b1_sep16_scaffold_81_12
unknown

Not on your lists

16129..16971
DNA (843bp) protein (281aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_81_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16919..17668)
DNA (750bp) protein (250aa)
crotonase Tax=Streptomyces rapamycinicus RepID=UPI0003830982
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EWM10675.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
crotonase
PLM1_100_b1_sep16_scaffold_81_14
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17665..18837)
DNA (1173bp) protein (391aa)
Acyl-CoA dehydrogenase domain-containing protein Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P561_STRVO
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EWM10676.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
acyl-CoA dehydrogenase
PLM1_100_b1_sep16_scaffold_81_15
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18856..20916)
DNA (2061bp) protein (687aa)
CoA-binding protein Tax=Streptomyces rapamycinicus RepID=UPI0003830A96
CoA-binding protein {ECO:0000313|EMBL:CDO23395.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
CoA-binding protein
PLM1_100_b1_sep16_scaffold_81_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20913..21719)
DNA (807bp) protein (269aa)
short-chain dehydrogenase Tax=Streptomyces rapamycinicus RepID=UPI0003830F8B
Peroxisomal trans-2-enoyl-CoA reductase {ECO:0000313|EMBL:EWM10678.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
short-chain dehydrogenase
PLM1_100_b1_sep16_scaffold_81_17
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21716..23509)
DNA (1794bp) protein (598aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=Saccharopolyspora erythraea RepID=A4F8E7_SACEN
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:CAM00322.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_100_b1_sep16_scaffold_81_18
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23506..24399)
DNA (894bp) protein (298aa)
Dipeptide transport system permease protein Tax=Saccharopolyspora erythraea RepID=A4F8E8_SACEN
dipeptide transport system permease
Peptide ABC transporter permease {ECO:0000313|EMBL:EQD82273.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_100_b1_sep16_scaffold_81_19
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24396..25349)
DNA (954bp) protein (318aa)
Peptide ABC transporter permease Tax=Saccharopolyspora erythraea D RepID=T2RSP9_SACER
Peptide ABC transporter permease {ECO:0000313|EMBL:EQD82274.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
oligopeptide/dipeptide ABC transporter permease
PLM1_100_b1_sep16_scaffold_81_20
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25374..26960)
DNA (1587bp) protein (529aa)
Probable peptide ABC transporter,substrate-binding protein Tax=Saccharopolyspora erythraea RepID=A4F8F0_SACEN
peptide ABC transporter,substrate-binding protein
Probable peptide ABC transporter,substrate-binding protein {ECO:0000313|EMBL:CAM00325.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_100_b1_sep16_scaffold_81_21
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27176..28045
DNA (870bp) protein (290aa)
Transcriptional regulator, TetR family Tax=Saccharopolyspora erythraea RepID=A4FGG0_SACEN
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CAM03135.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_100_b1_sep16_scaffold_81_22
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28038..28652
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N431_9ACTO
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACY98201.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_81_23
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28691..29692)
DNA (1002bp) protein (334aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6F1_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48833.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM1_100_b1_sep16_scaffold_81_24
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29811..30308
DNA (498bp) protein (166aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035E46FE
Uncharacterized protein {ECO:0000313|EMBL:CCH77112.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
regulatory protein MarR
PLM1_100_b1_sep16_scaffold_81_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30356..31570)
DNA (1215bp) protein (405aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003662E94
FAD-binding monooxygenase
Monooxygenase FAD-binding {ECO:0000313|EMBL:ABS28417.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_100_b1_sep16_scaffold_81_26
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31586..32836)
DNA (1251bp) protein (417aa)
Putative flavoprotein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI72_ANADF
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:ABS28418.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_100_b1_sep16_scaffold_81_27
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32919..33413)
DNA (495bp) protein (165aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036E15F8
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ABS28419.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_100_b1_sep16_scaffold_81_28
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33675..36398
DNA (2724bp) protein (908aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000377653B
Uncharacterized protein {ECO:0000313|EMBL:EPH41548.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
putative transcriptional regulator
PLM1_100_b1_sep16_scaffold_81_29
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36421..37032)
DNA (612bp) protein (204aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000367D81A
Uncharacterized protein {ECO:0000313|EMBL:EWM64082.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_81_30
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37129..38115)
DNA (987bp) protein (329aa)
hypothetical protein Tax=Microbacterium yannicii RepID=UPI000363EC9C
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV78770.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 1-30 of 50 in total

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