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PLM1_100_b1_sep16_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_82_1
unknown

Not on your lists

comp(2..250)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_82_2
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(417..821)
DNA (405bp) protein (135aa)
superoxide dismutase, ni (EC:1.15.1.1)
Superoxide dismutase, Ni {ECO:0000313|EMBL:ADL48741.1}; EC=1.15.1.1 {ECO:0000313|EMBL:ADL48741.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
superoxide dismutase Tax=Actinoplanes globisporus RepID=UPI00035C63EC
PLM1_100_b1_sep16_scaffold_82_3
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

921..1256
DNA (336bp) protein (112aa)
Nickel-type superoxide dismutase maturation protease Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F8Z2_VERMA
nickel-type superoxide dismutase maturation protease
Nickel-type superoxide dismutase maturation protease {ECO:0000313|EMBL:AEB47072.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_82_4
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1395..2576
DNA (1182bp) protein (394aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:AEW96473.1}; NADP-dependent malic enzyme (Conversion of malate into pyruvate) {ECO:0000313|EMBL:CCB76807.1}; EC=1.1.1.40 {ECO:0000313|EMBL:CCB76807.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
Malate dehydrogenase (Oxaloacetate-decarboxylating) Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JPC0_STREN
Malate dehydrogenase (oxaloacetate-decarboxylating)
PLM1_100_b1_sep16_scaffold_82_5
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2656..3081)
DNA (426bp) protein (142aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003606676
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG97499.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
PLM1_100_b1_sep16_scaffold_82_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3145..3699)
DNA (555bp) protein (185aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036718BF
flavin reductase domain-containing protein
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:CCH88179.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_100_b1_sep16_scaffold_82_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3785..4723
DNA (939bp) protein (313aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Micromonospora sp. (strain L5) RepID=E8SC37_MICSL
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADL48738.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_82_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4792..5448)
DNA (657bp) protein (219aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
FMN-dependent NADH-azoreductase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6T8_THECD
NAD(P)H dehydrogenase (quinone)
PLM1_100_b1_sep16_scaffold_82_9
unknown

Not on your lists

6111..6593
DNA (483bp) protein (161aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_82_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6590..6922
DNA (333bp) protein (111aa)
Transcriptional regulator, MarR/EmrR family protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B0D2_STRRD
MarR/EmrR family transcriptional regulator
Transcriptional regulator, MarR/EmrR family protein {ECO:0000313|EMBL:ACZ89138.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_82_11
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6948..7127)
DNA (180bp) protein (60aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F8Y4_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDN83508.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
PLM1_100_b1_sep16_scaffold_82_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7131..10877)
DNA (3747bp) protein (1249aa)
Alpha-ketoglutarate decarboxylase {ECO:0000313|EMBL:AGZ45848.1}; EC=4.1.1.71 {ECO:0000313|EMBL:AGZ45848.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
kgd; alpha-ketoglutarate decarboxylase (EC:4.1.1.71)
Alpha-ketoglutarate decarboxylase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9F8_9ACTO
PLM1_100_b1_sep16_scaffold_82_13
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11070..11930)
DNA (861bp) protein (287aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RQU6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP71502.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_82_14
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11927..12832)
DNA (906bp) protein (302aa)
ABC transporter related protein Tax=Micromonospora sp. (strain L5) RepID=E8SC49_MICSL
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ADL48726.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_82_15
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12892..14454)
DNA (1563bp) protein (521aa)
Putative phytoene dehydrogenase Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYF3_9ACTO
Putative phytoene dehydrogenase {ECO:0000313|EMBL:CCH16600.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
fad dependent oxidoreductase
PLM1_100_b1_sep16_scaffold_82_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14569..15000)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDE4_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81634.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_100_b1_sep16_scaffold_82_17
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15086..15775
DNA (690bp) protein (230aa)
UPI0003D00490 related cluster Tax=unknown RepID=UPI0003D00490
Uncharacterized protein {ECO:0000313|EMBL:ETA00152.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
PLM1_100_b1_sep16_scaffold_82_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15947..16237
DNA (291bp) protein (97aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037F4967
Uncharacterized protein {ECO:0000313|EMBL:EXG80413.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
SCC53.06; hypothetical protein
PLM1_100_b1_sep16_scaffold_82_19
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16345..16695)
DNA (351bp) protein (117aa)
anti-sigma factor antagonist Tax=Salinispora pacifica RepID=UPI000374C20A
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
anti-sigma factor antagonist
PLM1_100_b1_sep16_scaffold_82_20
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17112..17954
DNA (843bp) protein (281aa)
Transcriptional regulator, GntR family Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6D3_THEBD
GntR family transcriptional regulator {ECO:0000313|EMBL:KIH99328.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
GntR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_82_21
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18009..18404
DNA (396bp) protein (132aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI00036B3CC3
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62309.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_82_22
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18666..19538)
DNA (873bp) protein (291aa)
gluconolactonase (EC:3.1.1.17)
UPI0003CF8430 related cluster Tax=unknown RepID=UPI0003CF8430
Uncharacterized protein {ECO:0000313|EMBL:ESY64057.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
PLM1_100_b1_sep16_scaffold_82_23
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19684..21030)
DNA (1347bp) protein (449aa)
Formiminoglutamate deiminase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABX7_THECD
formiminoglutamate deiminase
Formiminoglutamate deiminase {ECO:0000313|EMBL:ACY99150.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_82_24
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21021..22214)
DNA (1194bp) protein (398aa)
allantoate amidohydrolase (EC:3.5.1.87)
hypothetical protein Tax=Mycobacterium sp. 155 RepID=UPI00036209EB
Allantoate amidohydrolase {ECO:0000313|EMBL:CDO22954.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
PLM1_100_b1_sep16_scaffold_82_25
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22383..23174
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZA4_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD41578.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_82_26
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23257..25659
DNA (2403bp) protein (801aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
glycosyl transferase Tax=Salinispora pacifica RepID=UPI000368B2D5
Membrane carboxypeptidase (Penicillin-binding protein) {ECO:0000313|EMBL:EXG79238.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_100_b1_sep16_scaffold_82_27
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25705..27435)
DNA (1731bp) protein (577aa)
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Malto-oligosyltrehalose trehalohydrolase Tax=Micromonospora sp. (strain L5) RepID=E8SDI0_MICSL
PLM1_100_b1_sep16_scaffold_82_28
unknown

Not on your lists

comp(27612..27830)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_82_29
unknown

Not on your lists

comp(27823..28014)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_82_30
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28384..29694
DNA (1311bp) protein (437aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI0003636FEE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY95770.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Displaying items 1-30 of 48 in total

View Taxonomy