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PLM1_100_b1_sep16_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_88_1
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..758)
DNA (756bp) protein (252aa)
Transposase IS116/IS110/IS902 family protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCJ4_INTC7
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ADU49598.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM1_100_b1_sep16_scaffold_88_2
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1258..1512)
DNA (255bp) protein (85aa)
Putative uncharacterized protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DFK0_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF90896.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM1_100_b1_sep16_scaffold_88_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1658..2353
DNA (696bp) protein (232aa)
sodium/hydrogen exchanger Tax=Saccharopolyspora spinosa RepID=UPI0002379DB8
Na+ antiporter {ECO:0000313|EMBL:EXG79096.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Na+/H+ antiporter
PLM1_100_b1_sep16_scaffold_88_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2350..3135
DNA (786bp) protein (262aa)
Na+/H+ antiporter Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B217_STRRD
Na+ antiporter {ECO:0000313|EMBL:EXG79096.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Na+/H+ antiporter
PLM1_100_b1_sep16_scaffold_88_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3141..3911)
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L0N1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG79097.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_88_6
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3963..5702
DNA (1740bp) protein (580aa)
Putative membrane protein with lysine transferase activity Tax=Frankia sp. (strain EuI1c) RepID=E3J7Z9_FRASU
Uncharacterized protein {ECO:0000313|EMBL:KJE22117.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
membrane protein with lysine transferase activity
PLM1_100_b1_sep16_scaffold_88_trna_1
unknown

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5873..5962
DNA (90bp)
transferRNA Ser
PLM1_100_b1_sep16_scaffold_88_trna_2
unknown

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5983..6055
DNA (73bp)
transferRNA Arg
PLM1_100_b1_sep16_scaffold_88_7
unknown

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comp(6155..6529)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_88_8
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6594..6875)
DNA (282bp) protein (94aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000376DD07
Uncharacterized protein {ECO:0000313|EMBL:EEL31389.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus Rock3-28.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_88_9
unknown

Not on your lists

comp(6880..7020)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_88_10
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7118..7645)
DNA (528bp) protein (176aa)
epimerase Tax=Salinispora pacifica RepID=UPI00037CEF73
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63359.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
NAD-dependent epimerase/dehydratase
PLM1_100_b1_sep16_scaffold_88_11
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7642..7965)
DNA (324bp) protein (108aa)
reductase Tax=Salinispora arenicola RepID=UPI00036AFFFF
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63359.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
NAD-dependent epimerase/dehydratase
PLM1_100_b1_sep16_scaffold_88_12
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8096..9205)
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Nocardiopsis sp. CNS639 RepID=UPI0003821604
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH66601.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM1_100_b1_sep16_scaffold_88_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9385..9810)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZE8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ42259.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_88_14
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10204..11280
DNA (1077bp) protein (359aa)
hypothetical protein Tax=Nocardiopsis prasina RepID=UPI0003779992
Uncharacterized protein {ECO:0000313|EMBL:CCH79196.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_88_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11329..12300)
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B403_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91237.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_88_16
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12297..13607)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7K5_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96594.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_88_17
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13604..14488)
DNA (885bp) protein (295aa)
sulfotransferase Tax=Actinomadura flavalba RepID=UPI000370CF0A
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ACY96598.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_88_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14485..15732)
DNA (1248bp) protein (416aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI000360ECCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96599.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_88_19
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15729..17156)
DNA (1428bp) protein (476aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037DF33F
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEI11133.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
PLM1_100_b1_sep16_scaffold_88_20
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17422..20796
DNA (3375bp) protein (1125aa)
PKD domain containing protein Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6S4_CELGA
PKD domain containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEI11134.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
PLM1_100_b1_sep16_scaffold_88_21
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21039..23882
DNA (2844bp) protein (948aa)
PKD domain containing protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PZ06_KRIFD
PKD domain containing protein
PKD domain containing protein {ECO:0000313|EMBL:ADB31800.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_88_22
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23987..25489)
DNA (1503bp) protein (501aa)
lipopolysaccharide biosynthesis protein Tax=Micromonospora sp. CNB394 RepID=UPI000378A582
LigA protein {ECO:0000313|EMBL:EWM66924.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
lipopolysaccharide biosynthesis protein
PLM1_100_b1_sep16_scaffold_88_23
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25486..27030)
DNA (1545bp) protein (515aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003646D00
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66611.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
multi antimicrobial extrusion protein mate
PLM1_100_b1_sep16_scaffold_88_24
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27027..28058)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000380D64F
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64291.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_88_25
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28045..29613)
DNA (1569bp) protein (523aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RGH5_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP72416.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
lipopolysaccharide biosynthesis protein
PLM1_100_b1_sep16_scaffold_88_26
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30042..31622
DNA (1581bp) protein (527aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7L4_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96603.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_88_27
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32401..32952)
DNA (552bp) protein (184aa)
GCN5-related N-acetyltransferase Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T2J9_MICAI
Sortase-like acyltransferase {ECO:0000313|EMBL:EXG79131.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
GCN5-like N-acetyltransferase
PLM1_100_b1_sep16_scaffold_88_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32975..33994)
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NBD6_KITSK
Helix-turn-helix protein {ECO:0000313|EMBL:EXG79132.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
Displaying items 1-30 of 51 in total

View Taxonomy