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PLM1_100_b1_sep16_scaffold_241

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_241_1
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

364..621
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YB54_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG88414.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_100_b1_sep16_scaffold_241_2
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

669..1127
DNA (459bp) protein (153aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI000347F3B4
DoxX family protein {ECO:0000313|EMBL:EOD66925.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
DoxX family protein
PLM1_100_b1_sep16_scaffold_241_3
unknown

Not on your lists

1265..1423
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_241_4
unknown

Not on your lists

comp(1420..1641)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_241_5
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1806..2009)
DNA (204bp) protein (68aa)
cold-shock protein Tax=Frankia sp. Iso899 RepID=UPI0003B426C6
cold-shock DNA-binding protein family
SPG23_c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28936.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
PLM1_100_b1_sep16_scaffold_241_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2614..3291
DNA (678bp) protein (226aa)
Secreted protein Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JJW8_STREN
secreted protein
Secreted protein {ECO:0000313|EMBL:AHH96878.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_241_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3999..4436
DNA (438bp) protein (146aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003701EF0
MerR family transcriptional regulator {ECO:0000313|EMBL:ETK37864.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
DNA binding domain-containing protein
PLM1_100_b1_sep16_scaffold_241_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4433..5221
DNA (789bp) protein (263aa)
Alpha/beta hydrolase fold Tax=Frankia sp. (strain EAN1pec) RepID=A8LA69_FRASN
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABW10949.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_100_b1_sep16_scaffold_241_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5234..5902
DNA (669bp) protein (223aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
tRNA (guanine-N(7)-)-methyltransferase Tax=Salinispora pacifica RepID=UPI0003755C14
tRNA (guanine-N(7)-)-methyltransferase
PLM1_100_b1_sep16_scaffold_241_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5954..6328
DNA (375bp) protein (125aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003619ADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91812.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_241_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6325..6900)
DNA (576bp) protein (192aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000380B949
Uncharacterized protein {ECO:0000313|EMBL:EWC58074.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
membrane protein
PLM1_100_b1_sep16_scaffold_241_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6897..8231)
DNA (1335bp) protein (445aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000375DBF4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40193.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_241_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8228..9037)
DNA (810bp) protein (270aa)
Putative ABC transporter ATP-binding protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H956_ACTM4
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64880.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
putative ABC transporter ATP-binding protein
PLM1_100_b1_sep16_scaffold_241_14
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9127..9954)
DNA (828bp) protein (276aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00036267D0
integral membrane protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAC68238.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_100_b1_sep16_scaffold_241_15
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9951..10490)
DNA (540bp) protein (180aa)
RNA polymerase sigma24 factor Tax=Amycolatopsis alba RepID=UPI00037D4D46
Conserved putative membrane protein
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KFZ79631.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
PLM1_100_b1_sep16_scaffold_241_16
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10663..11244
DNA (582bp) protein (194aa)
Copper resistance protein CopC Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QA26_STANL
copper resistance protein CopC
Copper resistance protein CopC {ECO:0000313|EMBL:ADD40738.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_241_17
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11250..13085
DNA (1836bp) protein (612aa)
copper resistance protein CopD Tax=Salinispora pacifica RepID=UPI0003646BE4
copper resistance D domain-containing protein
Copper resistance D domain protein {ECO:0000313|EMBL:ABV96121.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_100_b1_sep16_scaffold_241_18
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13117..14295)
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PXA3_STANL
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADD41366.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_241_19
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14379..15242
DNA (864bp) protein (288aa)
Redoxin Tax=Streptomyces sp. C RepID=D9VQR7_9ACTO
HxlR family transcriptional regulator {ECO:0000313|EMBL:KJK52530.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
HxlR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_241_20
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15289..15861)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00037960FF
gamma-butyrolactone autoregulator receptor
Gamma-butyrolactone autoregulator receptor {ECO:0000313|EMBL:AIJ26306.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_100_b1_sep16_scaffold_241_21
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15952..16992
DNA (1041bp) protein (347aa)
3-oxoacyl-ACP synthase Tax=Streptomyces auratus AGR0001 RepID=J1RHS9_9ACTO
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:EJJ03884.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
3-oxoacyl-ACP synthase
PLM1_100_b1_sep16_scaffold_241_22
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16994..17965
DNA (972bp) protein (324aa)
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI00035DC164
Uncharacterized protein {ECO:0000313|EMBL:EJJ03885.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III-like protein
PLM1_100_b1_sep16_scaffold_241_23
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17962..19836
DNA (1875bp) protein (625aa)
Peptide synthase Tax=Streptomyces auratus AGR0001 RepID=J1ZQT3_9ACTO
Peptide synthase {ECO:0000313|EMBL:EJJ03886.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
peptide synthase
PLM1_100_b1_sep16_scaffold_241_24
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19833..20855
DNA (1023bp) protein (341aa)
Putative dehydrogenase Tax=Streptomyces auratus AGR0001 RepID=J1RZB7_9ACTO
Putative dehydrogenase {ECO:0000313|EMBL:EJJ03887.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
putative dehydrogenase
PLM1_100_b1_sep16_scaffold_241_25
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20852..23845
DNA (2994bp) protein (998aa)
Amino acid adenylation domain-containing protein Tax=Streptomyces auratus AGR0001 RepID=J2JU18_9ACTO
Amino acid adenylation domain-containing protein {ECO:0000313|EMBL:EJJ03888.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_241_26
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23842..24408
DNA (567bp) protein (189aa)
GCN5-related N-acetyltransferase Tax=Streptomyces auratus AGR0001 RepID=J1RHT3_9ACTO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EJJ03889.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
PLM1_100_b1_sep16_scaffold_241_27
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24460..26322)
DNA (1863bp) protein (621aa)
hypothetical protein Tax=Streptomyces sp. CNS615 RepID=UPI00036A984D
Peptidylarginine deiminase type I {ECO:0000313|EMBL:KDN73465.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_241_28
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26482..28863
DNA (2382bp) protein (794aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI00037A100D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY97993.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Displaying 28 items

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