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PLM1_100_b1_sep16_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_244_1
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..773
DNA (771bp) protein (257aa)
Aminoglycoside phosphotransferase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B2R8_FRADG
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AEH07791.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_100_b1_sep16_scaffold_244_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1280..2050)
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9F1C5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91352.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM1_100_b1_sep16_scaffold_244_3
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2111..2683
DNA (573bp) protein (191aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00035D6AC7
NUDIX hydrolase {ECO:0000313|EMBL:KDS85623.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
NUDIX hydrolase
PLM1_100_b1_sep16_scaffold_244_4
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2694..3227
DNA (534bp) protein (178aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037EAA3C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP52971.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_100_b1_sep16_scaffold_244_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3224..3919)
DNA (696bp) protein (232aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4F4D1_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH90494.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_100_b1_sep16_scaffold_244_6
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3885..4529)
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PYM8_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB29874.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_244_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4668..5261
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090S2_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EAU66215.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_244_8
unknown

Not on your lists

5249..6790
DNA (1542bp) protein (514aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_244_9
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6787..7494
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LXK7_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL21681.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_100_b1_sep16_scaffold_244_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7491..7940
DNA (450bp) protein (150aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037203E9
Uncharacterized protein {ECO:0000313|EMBL:KHD78809.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_244_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7937..9607)
DNA (1671bp) protein (557aa)
ATPase central domain-containing protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F317_VERMA
ATPase central domain-containing protein
ATPase central domain-containing protein {ECO:0000313|EMBL:AEB47796.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_244_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9725..10114
DNA (390bp) protein (130aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00035E49F9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47795.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_244_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10111..10599
DNA (489bp) protein (163aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037203E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47794.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_244_14
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10833..11831
DNA (999bp) protein (333aa)
tellurium resistance protein TerC Tax=Longispora albida RepID=UPI000373DF8A
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60960.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
integral membrane protein TerC
PLM1_100_b1_sep16_scaffold_244_15
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12098..13468
DNA (1371bp) protein (457aa)
Class III aminotransferase Tax=Micromonospora sp. ATCC 39149 RepID=C4RES0_9ACTO
Class III aminotransferase {ECO:0000313|EMBL:EEP70099.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
putative diaminobutyrate--2-oxoglutarate transaminase
PLM1_100_b1_sep16_scaffold_244_16
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13465..14970
DNA (1506bp) protein (502aa)
Pyridoxal-dependent decarboxylase Tax=Micromonospora sp. ATCC 39149 RepID=C4RES1_9ACTO
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:EEP70100.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
putative L-2,4-diaminobutyrate decarboxylase
PLM1_100_b1_sep16_scaffold_244_17
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14967..16298
DNA (1332bp) protein (444aa)
L-lysine 6-monooxygenase (EC:1.14.13.59)
L-lysine 6-monooxygenase Tax=Micromonospora sp. ATCC 39149 RepID=C4RES2_9ACTO
L-lysine 6-monooxygenase {ECO:0000313|EMBL:EEP70101.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM1_100_b1_sep16_scaffold_244_18
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16295..18079
DNA (1785bp) protein (595aa)
IucA/IucC family protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RES3_9ACTO
IucA/IucC family protein {ECO:0000313|EMBL:EEP70102.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
IucA/IucC family protein
PLM1_100_b1_sep16_scaffold_244_19
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18076..19770
DNA (1695bp) protein (565aa)
Uncharacterized protein Tax=Streptomyces niveus NCIMB 11891 RepID=V6K4N3_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST26356.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
Siderophore synthetase superfamily, group A @ Siderophore synthetase large component, acetyltransferase
PLM1_100_b1_sep16_scaffold_244_20
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19767..21071
DNA (1305bp) protein (435aa)
Glutamate-putrescine ligase Tax=Micromonospora sp. ATCC 39149 RepID=C4RES4_9ACTO
Glutamate-putrescine ligase {ECO:0000313|EMBL:EEP70103.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
glnA3; putative glutamine synthetase
PLM1_100_b1_sep16_scaffold_244_21
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21149..22342)
DNA (1194bp) protein (398aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase Tax=Micromonospora sp. ATCC 39149 RepID=C4RES5_9ACTO
Diaminopimelate decarboxylase {ECO:0000313|EMBL:EEP70105.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM1_100_b1_sep16_scaffold_244_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22420..23001
DNA (582bp) protein (194aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00037B0590
Uncharacterized protein {ECO:0000313|EMBL:KFE63274.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_244_23
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22998..23456)
DNA (459bp) protein (153aa)
Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AVC5_STRRD
nitrite reductase and ring-hydroxylating dioxygenase erredoxin subunit-like protein
Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase-like protein {ECO:0000313|EMBL:ACZ88776.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_244_24
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23484..24041)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F6R8_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB45593.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_244_25
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24074..24220)
DNA (147bp) protein (49aa)
Putative uncharacterized protein Tax=Streptomyces sviceus ATCC 29083 RepID=B5I0K6_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDY58611.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_244_26
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24391..24726)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003765470
Uncharacterized protein {ECO:0000313|EMBL:KFF97116.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
PLM1_100_b1_sep16_scaffold_244_27
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24883..25452
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Micromonospora RepID=E8S297_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL47108.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_244_28
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25479..26228)
DNA (750bp) protein (250aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003755506
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADD45175.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_244_29
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26292..27164
DNA (873bp) protein (291aa)
Phytanoyl-CoA dioxygenase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PRH9_KRIFD
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ADB34897.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_244_30
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27169..27327)
DNA (159bp) protein (53aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
mRNA interferase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AV65_FRADG
transcriptional modulator of MazE/toxin MazF
Displaying items 1-30 of 32 in total

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