ggKbase home page

PLM1_100_b1_sep16_scaffold_327

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_327_31
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29437..30288
DNA (852bp) protein (284aa)
Binding-protein-dependent transport systems inner membrane component Tax=Actinoplanes sp. N902-109 RepID=R4L6C3_9ACTO
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AGL14158.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_100_b1_sep16_scaffold_327_32
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30362..31372
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037AD5B2
Alcohol dehydrogenase {ECO:0000313|EMBL:KIZ17104.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
alcohol dehydrogenase GroES domain protein
PLM1_100_b1_sep16_scaffold_327_33
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31375..32415
DNA (1041bp) protein (347aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003761CC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH95373.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_327_34
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32412..33914
DNA (1503bp) protein (501aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000377B65E
putative L-xylulose kinase
Putative L-xylulose kinase {ECO:0000313|EMBL:AHH95374.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_327_trna_1
unknown

Not on your lists

34047..34120
DNA (74bp)
transferRNA Met
PLM1_100_b1_sep16_scaffold_327_35
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34066..35763)
DNA (1698bp) protein (566aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0REN8_FRAAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ64070.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM1_100_b1_sep16_scaffold_327_36
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35760..36416)
DNA (657bp) protein (219aa)
Xre family DNA-binding protein Tax=Frankia sp. (strain EuI1c) RepID=E3J644_FRASU
XRE family transcriptional regulator
Xre family DNA-binding protein {ECO:0000313|EMBL:ADP78335.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_100_b1_sep16_scaffold_327_37
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36562..36792
DNA (231bp) protein (77aa)
Integrase/resolvase-related protein Tax=Amycolatopsis mediterranei RepID=D8I525_AMYMU
Uncharacterized protein {ECO:0000313|EMBL:EXG80014.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
integrase/resolvase-related protein
PLM1_100_b1_sep16_scaffold_327_38
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37215..37781)
DNA (567bp) protein (189aa)
Putative Zn peptidase Tax=Mycobacterium smegmatis JS623 RepID=L0IVY9_MYCSM
putative Zn peptidase
Putative Zn peptidase {ECO:0000313|EMBL:AGB22131.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM1_100_b1_sep16_scaffold_327_39
unknown

Not on your lists

comp(37814..38170)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_327_40
Corynebacterium efficiens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38672..41071
DNA (2400bp) protein (800aa)
restriction endonuclease subunit M Tax=Amycolatopsis benzoatilytica RepID=UPI00037F828F
Putative restriction enzyme subunit M {ECO:0000313|EMBL:BAC17067.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM; 11189 / NBRC 100395).;"
restriction enzyme subunit M
PLM1_100_b1_sep16_scaffold_327_41
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41064..42371
DNA (1308bp) protein (436aa)
hypothetical protein Tax=Mycobacterium abscessus RepID=UPI00035C1C51
type I restriction-modification system, S subunit
Tax=GWC1_Azotobacter_66_9_curated
PLM1_100_b1_sep16_scaffold_327_42
Corynebacterium efficiens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42368..45655
DNA (3288bp) protein (1096aa)
DEAD/DEAH box helicase Tax=Mycobacterium abscessus RepID=UPI000304AC3D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC17069.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM; 11189 / NBRC 100395).;"
PLM1_100_b1_sep16_scaffold_327_43
Corynebacterium efficiens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45652..46374
DNA (723bp) protein (241aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI000362A31B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC17070.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM; 11189 / NBRC 100395).;"
PLM1_100_b1_sep16_scaffold_327_44
GWD2_OD1_42_14, Parcubacteria, Bacteria

Not on your lists

46391..46852
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi GY50 RepID=V5QCS8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKS35641.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_42_14.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_327_45
unknown

Not on your lists

comp(47119..47493)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_327_46
CG_Falkow_01, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(47621..49270)
DNA (1650bp) protein (550aa)
UPI0003CFAD8D related cluster Tax=unknown RepID=UPI0003CFAD8D
resolvase domain-containing protein
Tax=CG_Falkow_01
PLM1_100_b1_sep16_scaffold_327_47
unknown

Not on your lists

comp(49374..49637)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_327_48
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49710..50693)
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NHK7_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KJS57066.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_327_49
unknown

Not on your lists

comp(50703..50900)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_327_50
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50971..51543)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NHL1_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KJS57064.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_327_51
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51630..52232)
DNA (603bp) protein (201aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFU8_THET1
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
RNA polymerase ECF-type sigma factor
PLM1_100_b1_sep16_scaffold_327_52
unknown

Not on your lists

comp(52455..52724)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_327_53
unknown

Not on your lists

comp(52721..52993)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_327_54
unknown

Not on your lists

comp(52980..53303)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_327_55
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53616..54284)
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NHL4_KITSK
Uncharacterized protein {ECO:0000313|EMBL:BAJ30994.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
hypothetical protein
Displaying items 31-56 of 56 in total

View Taxonomy