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PLM1_100_b1_sep16_scaffold_645

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_645_1
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2..883
DNA (882bp) protein (294aa)
Transposase IS4 family protein Tax=Frankia sp. (strain EAN1pec) RepID=A8L978_FRASN
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ABW12217.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_100_b1_sep16_scaffold_645_2
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(880..1830)
DNA (951bp) protein (317aa)
hypothetical protein, partial Tax=Kribbella catacumbae RepID=UPI0003800278
transposase
Transposase {ECO:0000313|EMBL:AEV73092.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM1_100_b1_sep16_scaffold_645_3
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2251..2817)
DNA (567bp) protein (189aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00034CD14A
Uncharacterized protein {ECO:0000313|EMBL:KDS88854.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
PLM1_100_b1_sep16_scaffold_645_4
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3433..5025)
DNA (1593bp) protein (531aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000380CF40
Recombinase {ECO:0000313|EMBL:CEL22151.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Site-specific recombinase DNA invertase Pin
PLM1_100_b1_sep16_scaffold_645_5
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5067..6914
DNA (1848bp) protein (616aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035ED7A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP54905.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_100_b1_sep16_scaffold_645_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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7025..8053
DNA (1029bp) protein (343aa)
ROK family protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YB26_THEBD
ROK family transcriptional regulator {ECO:0000313|EMBL:ETK37482.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ROK family protein
PLM1_100_b1_sep16_scaffold_645_7
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8124..10532)
DNA (2409bp) protein (803aa)
Putative cyclic lipopeptide acylase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H4Z1_ACTM4
Putative cyclic lipopeptide acylase {ECO:0000313|EMBL:BAL88078.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
putative cyclic lipopeptide acylase
PLM1_100_b1_sep16_scaffold_645_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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10729..11439
DNA (711bp) protein (237aa)
Regulatory protein TetR Tax=Frankia sp. CN3 RepID=G6H9N5_9ACTO
putative TetR-family transcriptional regulator
Putative TetR-family transcriptional regulator {ECO:0000313|EMBL:AGZ38952.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_645_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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11417..12340
DNA (924bp) protein (308aa)
tetronasin ABC transporter ATP-binding protein Tax=Actinopolymorpha alba RepID=UPI00037699CF
Tetronasin ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK35679.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative ABC transporter ATP-binding protein
PLM1_100_b1_sep16_scaffold_645_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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12337..13944
DNA (1608bp) protein (536aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000373A17F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ38954.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_645_11
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(13970..14938)
DNA (969bp) protein (323aa)
xyloglucanase Tax=Nocardiopsis halotolerans RepID=UPI000374547A
cellulose-binding family II protein
Cellulose-binding family II {ECO:0000313|EMBL:ADH70941.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM1_100_b1_sep16_scaffold_645_12
unknown

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15000..15491
DNA (492bp) protein (164aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_645_13
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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15663..15872
DNA (210bp) protein (70aa)
Putative uncharacterized protein Tax=Gordonia effusa NBRC 100432 RepID=H0QWJ4_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB17195.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_645_14
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(16081..17322)
DNA (1242bp) protein (414aa)
Putative serine protease Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BDF1_STRRD
serine protease
Putative serine protease {ECO:0000313|EMBL:ACZ86240.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_645_15
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17769..18932
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000380FE62
Uncharacterized protein {ECO:0000313|EMBL:KJK12498.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_645_16
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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comp(19148..19606)
DNA (459bp) protein (153aa)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI00035DFEFF
CHRD domain-containing protein
Tax=RBG_13_Chloroflexi_66_10_curated
Displaying 16 items

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