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PLM1_100_b1_sep16_scaffold_702

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_702_1

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217..690
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR10392.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;"
PLM1_100_b1_sep16_scaffold_702_2
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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988..1635
DNA (648bp) protein (216aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037CD7C3
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJK44648.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
LuxR family two component transcriptional regulator
PLM1_100_b1_sep16_scaffold_702_3
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1638..2561)
DNA (924bp) protein (308aa)
Type II secretion system protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT4_THECD
Uncharacterized protein {ECO:0000313|EMBL:KJK44649.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
type II secretion system protein
PLM1_100_b1_sep16_scaffold_702_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2564..4510)
DNA (1947bp) protein (649aa)
Type II secretion system protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT5_THECD
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ACY97424.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_702_5
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4507..5868)
DNA (1362bp) protein (454aa)
Type II secretion system protein E Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8T1_INTC7
Uncharacterized protein {ECO:0000313|EMBL:KJK44650.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
type II secretion system protein E
PLM1_100_b1_sep16_scaffold_702_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5865..7046)
DNA (1182bp) protein (394aa)
AAA ATPase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VS29_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK44651.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
AAA ATPase
PLM1_100_b1_sep16_scaffold_702_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(7067..7885)
DNA (819bp) protein (273aa)
Flp pilus assembly protein CpaB Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVB9_9ACTO
Flp pilus assembly protein CpaB
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:AGZ39650.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_702_8
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7911..9041)
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Janibacter sp. HTCC2649 RepID=A3TQW3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJK44653.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_702_9
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9029..9427)
DNA (399bp) protein (133aa)
TadE family protein Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UXV2_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KJK44654.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
TadE-like protein
PLM1_100_b1_sep16_scaffold_702_10
unknown

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comp(9424..9564)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_702_11
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9635..9814)
DNA (180bp) protein (60aa)
Pilus subunit protein PilA Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRT7_BLASD
Pilus assembly protein {ECO:0000313|EMBL:KHL05039.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
pilA2; Pilus subunit protein PilA
PLM1_100_b1_sep16_scaffold_702_12
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10137..10856)
DNA (720bp) protein (240aa)
peptidase A24 Tax=Salinispora pacifica RepID=UPI000370A9A0
Peptidase A24 {ECO:0000313|EMBL:KKA41787.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
pppA; prepilin signal peptidase
PLM1_100_b1_sep16_scaffold_702_13
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(10853..11530)
DNA (678bp) protein (226aa)
Putative two-component system response regulator Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HIP1_ACTM4
putative two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:BAL92878.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_100_b1_sep16_scaffold_702_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11527..12726)
DNA (1200bp) protein (400aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Sensor protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLY0_TISMK
pdhS; Sensor protein
PLM1_100_b1_sep16_scaffold_702_15
unknown

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13163..13492
DNA (330bp) protein (110aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_702_16
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13633..14178)
DNA (546bp) protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN30747.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
PLM1_100_b1_sep16_scaffold_702_17
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(14517..16496)
DNA (1980bp) protein (660aa)
Cna B domain protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SE78_INTC7
Cna B domain-containing protein
Cna B domain protein {ECO:0000313|EMBL:ADU48726.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM1_100_b1_sep16_scaffold_702_18
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(16843..17310)
DNA (468bp) protein (156aa)
Putative uncharacterized protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6X3_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU75986.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
Displaying 18 items

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