ggKbase home page

PLM1_100_b1_sep16_scaffold_716

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_716_1
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..254)
DNA (252bp) protein (84aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00037CFBA6
Bacteriophage resistance protein PglY {ECO:0000313|EMBL:EWM65540.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
phage resistance protein
PLM1_100_b1_sep16_scaffold_716_2
unknown

Not on your lists

comp(356..754)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2ND76_9ACTO
PLM1_100_b1_sep16_scaffold_716_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(849..1265)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2ND76_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH20168.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
PLM1_100_b1_sep16_scaffold_716_4
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1710..2249)
DNA (540bp) protein (180aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RRL5_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP75292.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_716_5
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2286..2807)
DNA (522bp) protein (174aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI0003777292
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66667.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_716_6
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3147..3323)
DNA (177bp) protein (59aa)
hypothetical protein Tax=Streptomyces sp. SS RepID=UPI0002DAC75D
Alpha/beta hydrolase {ECO:0000313|EMBL:KDS88194.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_716_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3813..4190
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Rhodococcus RepID=K8Y0T1_RHOOP
Extradiol dioxygenase {ECO:0000313|EMBL:AII05104.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_716_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4320..5594
DNA (1275bp) protein (425aa)
Serine/threonine protein kinase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B6A8_STRRD
Uncharacterized protein {ECO:0000313|EMBL:EXG79282.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
serine/threonine protein kinase-like protein
PLM1_100_b1_sep16_scaffold_716_9
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5613..6179)
DNA (567bp) protein (189aa)
hypothetical protein Tax=Streptomyces rapamycinicus RepID=UPI0003830E87
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP60884.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_100_b1_sep16_scaffold_716_10
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6241..6873
DNA (633bp) protein (211aa)
hypothetical protein Tax=Streptomyces rapamycinicus RepID=UPI00038318F6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP60880.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_100_b1_sep16_scaffold_716_11
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7038..8627
DNA (1590bp) protein (530aa)
Phospholipase D/Transphosphatidylase Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T4M7_MICAI
phospholipase D/transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ADL45738.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_716_12
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8723..9505
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P5W7_STRVO
3-hydroxybutyrate dehydrogenase
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AEM85295.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM1_100_b1_sep16_scaffold_716_13
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9515..11389
DNA (1875bp) protein (625aa)
CdaR family transcriptional regulator Tax=Micromonospora sp. ATCC 39149 RepID=C4RGT4_9ACTO
CdaR family transcriptional regulator {ECO:0000313|EMBL:EEP74506.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
transcriptional regulator CdaR
PLM1_100_b1_sep16_scaffold_716_14
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11514..12566)
DNA (1053bp) protein (351aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037A9F8D
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KGN42239.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
amino acid ABC transporter
PLM1_100_b1_sep16_scaffold_716_15
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12563..13435)
DNA (873bp) protein (291aa)
ABC transporter permease Tax=Kribbella catacumbae RepID=UPI00036E6616
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABP54267.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_100_b1_sep16_scaffold_716_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13462..14724)
DNA (1263bp) protein (421aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003726BF9
ABC-type branched-chain amino acid transport systems, extracellular component {ECO:0000313|EMBL:CCH17531.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_716_17
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14780..15472)
DNA (693bp) protein (231aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) {ECO:0000313|EMBL:CCH17530.1}; EC=3.6.3.27 {ECO:0000313|EMBL:CCH17530.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N8V4_9ACTO
ABC transporter-like protein
PLM1_100_b1_sep16_scaffold_716_18
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15465..16226)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Streptomyces RepID=UPI00037B2018
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKH81040.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
ABC transporter-like protein
PLM1_100_b1_sep16_scaffold_716_19
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16384..17112)
DNA (729bp) protein (243aa)
Peptide chain release factor 2 Tax=Janibacter sp. HTCC2649 RepID=A3TG58_9MICO
Peptide chain release factor 2 {ECO:0000313|EMBL:EAP99818.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
LigA
Displaying 19 items

View Taxonomy