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PLM1_100_b1_sep16_scaffold_931

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_931_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..509)
DNA (507bp) protein (169aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037DC0C0
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:ACZ87037.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_931_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

511..936
DNA (426bp) protein (142aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXV1_9ACTO
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCH16398.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_100_b1_sep16_scaffold_931_3
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

938..1489
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PXF1_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD41414.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_931_4
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2205..2405)
DNA (201bp) protein (67aa)
regulator Tax=Salinispora arenicola RepID=UPI00036900B1
Uncharacterized protein {ECO:0000313|EMBL:KDN23145.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_931_5
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2398..3252)
DNA (855bp) protein (285aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00035EB2F9
Uncharacterized protein {ECO:0000313|EMBL:KDA40845.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
helix-turn-helix domain-containing protein
PLM1_100_b1_sep16_scaffold_931_6
unknown

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comp(3428..3559)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_931_7
unknown

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3742..3993
DNA (252bp) protein (84aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_931_8
unknown

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comp(4412..4936)
DNA (525bp) protein (175aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_931_trna_1
unknown

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comp(5073..5154)
DNA (82bp)
transferRNA Tyr
PLM1_100_b1_sep16_scaffold_931_9
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5249..5740
DNA (492bp) protein (164aa)
hypothetical protein Tax=Amycolatopsis RepID=UPI0002629129
UPF0234 protein yajQ
UPF0234 protein AMETH_0554 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_100_b1_sep16_scaffold_931_10
unknown

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comp(5794..6180)
DNA (387bp) protein (129aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_931_11
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6303..7151)
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBJ2_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC43844.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM1_100_b1_sep16_scaffold_931_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7539..8825)
DNA (1287bp) protein (429aa)
Major facilitator superfamily MFS_1 Tax=Micromonospora RepID=D9SY81_MICAI
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62949.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
major facilitator superfamily protein
PLM1_100_b1_sep16_scaffold_931_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8934..10151)
DNA (1218bp) protein (406aa)
Major facilitator superfamily MFS_1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S617_GEOOG
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB73234.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_100_b1_sep16_scaffold_931_14
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10248..10784
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RN42_BLASD
Uncharacterized protein {ECO:0000313|EMBL:KGH43638.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_931_15
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10798..11712)
DNA (915bp) protein (305aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
Protease HtpX homolog Tax=Micromonospora sp. ATCC 39149 RepID=C4RBT6_9ACTO
peptidase M48 Ste24p
PLM1_100_b1_sep16_scaffold_931_16
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11859..12995)
DNA (1137bp) protein (379aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI000374E505
Uncharacterized protein {ECO:0000313|EMBL:KJY30035.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_931_17
unknown

Not on your lists

comp(12999..13253)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_931_18
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13348..14892)
DNA (1545bp) protein (515aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
NADH-quinone oxidoreductase subunit N Tax=Micromonospora sp. (strain L5) RepID=E8SBQ4_MICSL
NADH/ubiquinone/plastoquinone (complex i)
Displaying 19 items

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