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PLM1_100_b1_sep16_scaffold_2520

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2520_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1..141
DNA (141bp) protein (47aa)
Epoxide hydrolase domain protein Tax=Frankia sp. EUN1f RepID=D3CTN8_9ACTO
Epoxide hydrolase domain protein {ECO:0000313|EMBL:EFC85928.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
epoxide hydrolase
PLM1_100_b1_sep16_scaffold_2520_2
unknown

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453..719
DNA (267bp) protein (89aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2520_3
unknown

Not on your lists

746..1018
DNA (273bp) protein (91aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2520_4
unknown

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comp(1441..2124)
DNA (684bp) protein (228aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2520_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2590..3045
DNA (456bp) protein (152aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Alkylhydroperoxidase like protein, AhpD family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQJ9_9CHLR
hypothetical protein
PLM1_100_b1_sep16_scaffold_2520_6
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3109..3570
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4QSY4_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK25456.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_100_b1_sep16_scaffold_2520_7
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4237..4527
DNA (291bp) protein (97aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003617103
Uncharacterized protein {ECO:0000313|EMBL:ELP68572.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_2520_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4584..6281)
DNA (1698bp) protein (566aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9R6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44656.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_100_b1_sep16_scaffold_2520_9
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6597..7316
DNA (720bp) protein (240aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003783395
Alpha/beta hydrolase {ECO:0000313|EMBL:KHL10565.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
alpha/beta hydrolase fold protein
PLM1_100_b1_sep16_scaffold_2520_10
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7717..8106)
DNA (390bp) protein (130aa)
Putative MerR family transcriptional regulator Tax=Rhodococcus opacus (strain B4) RepID=C1AS12_RHOOB
MerR family transcriptional regulator {ECO:0000313|EMBL:KJV27598.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
MerR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_2520_11
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8198..8674
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN37760.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
PLM1_100_b1_sep16_scaffold_2520_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8832..9341)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L093_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH17240.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_2520_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9503..10270)
DNA (768bp) protein (256aa)
Transcriptional regulator, MerR family Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P3U8_STRVO
MerR family transcriptional regulator {ECO:0000313|EMBL:ETK31704.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
MerR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_2520_14
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10393..10920
DNA (528bp) protein (176aa)
Erythromycin esterase Tax=Rhodococcus sp. EsD8 RepID=N1M9I8_9NOCA
Erythromycin esterase {ECO:0000313|EMBL:KDE14689.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_2520_15
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11182..11571
DNA (390bp) protein (130aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00035EF7C3
Uncharacterized protein {ECO:0000313|EMBL:EOD66781.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
phosphoribosylglycinamide formyltransferase protein
PLM1_100_b1_sep16_scaffold_2520_16
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11746..11922
DNA (177bp) protein (59aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI00034B56B9
Oxidoreductase {ECO:0000313|EMBL:EFL08303.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
oxidoreductase
PLM1_100_b1_sep16_scaffold_2520_17
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11943..12734)
DNA (792bp) protein (264aa)
Transcriptional regulator, XRE family protein Tax=Marinobacter algicola DG893 RepID=A6EVA8_9ALTE
XRE family transcriptional regulator {ECO:0000313|EMBL:GAM44967.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
XRE family transcriptional regulator
PLM1_100_b1_sep16_scaffold_2520_18
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12820..13146
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Jannaschia sp. (strain CCS1) RepID=Q28P17_JANSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD55545.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
PLM1_100_b1_sep16_scaffold_2520_19
unknown

Not on your lists

comp(13065..13289)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2520_20
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13502..14452)
DNA (951bp) protein (317aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PND8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP78946.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_100_b1_sep16_scaffold_2520_21
RLO_PLX_64_10, Bacteria

Not on your lists

comp(14700..15683)
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PVT0_9ACTO
RNA polymerase factor sigma-70
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_100_b1_sep16_scaffold_2520_22
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15990..16904
DNA (915bp) protein (305aa)
hypothetical protein Tax=Streptomyces viridosporus RepID=UPI0001AF1466
Putative uncharacterized protein {ECO:0000313|EMBL:EFE69670.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
hypothetical protein
Displaying 22 items

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