ggKbase home page

PLM1_100_b1_sep16_scaffold_2620

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2620_1
unknown

Not on your lists

3..71
DNA (69bp) protein (23aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2620_2
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

164..1735
DNA (1572bp) protein (524aa)
Transposase IS66 Tax=Frankia sp. (strain CcI3) RepID=Q2JBV2_FRASC
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ABD11240.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_100_b1_sep16_scaffold_2620_3
unknown

Not on your lists

comp(1780..1971)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2620_4
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1973..3034
DNA (1062bp) protein (354aa)
IS21 family transposase IstA Tax=Mycobacterium abscessus subsp. bolletii CCUG 48898 = JCM 15300 RepID=H0IBR4_MYCAB
mobile element protein
Transposase {ECO:0000313|EMBL:KCN31203.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis BTB05-348.;"
PLM1_100_b1_sep16_scaffold_2620_5
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3034..3600
DNA (567bp) protein (189aa)
IS21 family element, transposase istB Tax=Arthrobacter aurescens (strain TC1) RepID=A1RCG3_ARTAT
transposase
IS21 family element, transposase istB {ECO:0000313|EMBL:ABM10483.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain TC1).;"
PLM1_100_b1_sep16_scaffold_2620_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3612..4265
DNA (654bp) protein (218aa)
Bifunctional deaminase-reductase domain protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BUW5_BEUC1
Deaminase reductase {ECO:0000313|EMBL:ETK37664.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
bifunctional deaminase-reductase domain-containing protein
PLM1_100_b1_sep16_scaffold_2620_7
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4252..4695
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Saccharomonospora marina XMU15 RepID=H5X4Q6_9PSEU
YCII-like protein
Uncharacterized protein {ECO:0000313|EMBL:EHR51132.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
PLM1_100_b1_sep16_scaffold_2620_8
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4692..5927
DNA (1236bp) protein (412aa)
RNA polymerase subunit sigma-24 Tax=Actinopolymorpha alba RepID=UPI000376A807
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98853.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_2620_9
Gordonia effusa, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6059..6412
DNA (354bp) protein (118aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia effusa NBRC 100432.;"
Peptide methionine sulfoxide reductase MsrA Tax=Gordonia effusa NBRC 100432 RepID=H0QVM0_9ACTO
Peptide methionine sulfoxide reductase
PLM1_100_b1_sep16_scaffold_2620_10
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6559..7497
DNA (939bp) protein (313aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000381129B
hypothetical protein
Cyclase {ECO:0000313|EMBL:CDR17668.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
PLM1_100_b1_sep16_scaffold_2620_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7831..8028
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BDA9_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86198.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_2620_12
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8172..8711)
DNA (540bp) protein (180aa)
Aminoglycoside phosphotransferase Tax=Micromonospora sp. ATCC 39149 RepID=C4RJR4_9ACTO
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EEP72765.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
aminoglycoside phosphotransferase
PLM1_100_b1_sep16_scaffold_2620_13
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8714..8914)
DNA (201bp) protein (67aa)
Aminoglycoside phosphotransferase Tax=Micromonospora sp. ATCC 39149 RepID=C4RJR4_9ACTO
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EEP72765.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
aminoglycoside phosphotransferase
PLM1_100_b1_sep16_scaffold_2620_14
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9091..10116
DNA (1026bp) protein (342aa)
Uncharacterized protein Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CG13_STRBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO29197.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
PLM1_100_b1_sep16_scaffold_2620_15
unknown

Not on your lists

comp(10261..11670)
DNA (1410bp) protein (470aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8S2E0_MICSL
hypothetical protein
PLM1_100_b1_sep16_scaffold_2620_16
unknown

Not on your lists

comp(11636..12352)
DNA (717bp) protein (239aa)

This feature has no annotations

Displaying 16 items

View Taxonomy