ggKbase home page

PLM1_100_b1_sep16_scaffold_63_16

Organism: PLM1_100_b1_sep16_Acidothermus_cellulolyticus_70_13

near complete RP 51 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 15521..16330

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator Tax=Streptomyces acidiscabies RepID=UPI000288F0AA similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 245.0
  • Bit_score: 214
  • Evalue 1.20e-52
IclR family transcriptional regulator {ECO:0000313|EMBL:EOM78543.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 254.0
  • Bit_score: 204
  • Evalue 1.30e-49
transcriptional regulator, IclR family similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 262.0
  • Bit_score: 203
  • Evalue 7.50e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus rhodnii → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGACCGCGTTGCAGGAGATCAGCAGGCCGTCCCAGGACGCCGCCCAGACGACTCGCGCGGTGGTGGACAAGGCTTTCACGCTGCTGGAGGCGTGGGACCACCGTGGCGAGAGCCTCGGCGTCTCCGAACTGGCGCGCCGGACCGGCCTCCCCAAGTCCACCAGCCATCGGCTTCTCGGCATCCTGGAAGCGGCCGGACTGATCGAGCGGCTCGCCACCGGGTACCGCTTCGGCGACCGGCTGCACGGCTTCTCCGGACTCTTCAGCACCGAGTACCCGGCGGAACTGCGCGAGGTGAGCCTGCCGTTCCTCCAGGACCTTTACGAGCTGACCCACGAGACGATCCACCTCGGCGTTCTCGACGGCACCGATGTCCACTGTGTGGAGAAGCTCTACGGCCACCGGCGTAGCCCGGTCCGCTCGCGGGTCGGCGGCGCCCTCCCGGCCCACTCCACCGCGCTCGGCAAGGCGCTGCTCGCCTACTCCTGCCCGGACACCCAGCGAGCCGTCCTCCACACCACCCTGCGCGCCTACACCGCCGCCACCGTCACGCAGCCGCTGCAGCTCACCGCCGAGCTGCGCGCCACCCTGCGCCACGGTCTCGCCTACGACCGCCAGGAGACCCACCCCGAGGTCACCTGCGTTGCCGCCCCAGTGCTGAACAGCAGCGGCCAGGCCATCGCCGCGATCTCGATCAGCGGGCCGATTGACCGGTTCAACCCGGCGACCGTGATCGAGCGGCTCCGTCGTGCGGCGCGTGCCGCGTCCCTTGCCCTGGCCGCCCCCCGTCCCGAGCAGAACGCCGCCTAG
PROTEIN sequence
Length: 270
MTALQEISRPSQDAAQTTRAVVDKAFTLLEAWDHRGESLGVSELARRTGLPKSTSHRLLGILEAAGLIERLATGYRFGDRLHGFSGLFSTEYPAELREVSLPFLQDLYELTHETIHLGVLDGTDVHCVEKLYGHRRSPVRSRVGGALPAHSTALGKALLAYSCPDTQRAVLHTTLRAYTAATVTQPLQLTAELRATLRHGLAYDRQETHPEVTCVAAPVLNSSGQAIAAISISGPIDRFNPATVIERLRRAARAASLALAAPRPEQNAA*