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PLM1_100_b1_sep16_scaffold_63_17

Organism: PLM1_100_b1_sep16_Acidothermus_cellulolyticus_70_13

near complete RP 51 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 16364..16960

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigL Tax=Streptomyces RepID=V4IJV2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 162.0
  • Bit_score: 153
  • Evalue 1.80e-34
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 164.0
  • Bit_score: 184
  • Evalue 1.00e-43
RNA polymerase sigma factor SigL, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 162.0
  • Bit_score: 152
  • Evalue 8.60e-35

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGACCAGCACGCGTTTCTGCTCCACGCCCACGATTCAGCCCCGGCTGCGGTTGGCCGGATCCGGGCCGACCACGATTCACGAGCGGGACATGGAAGCGATCTGTCGCCGCCACGGTCACGCGCTCCATAGGTACGTGCTGTCGTTGACTTTCGGCGACCAGCACCTCGCCGAGGACATCGTCCAGGAGACGTTCCTGCGGGCGTGGCGCAGTCCCGAGCTGGTCACCGACGGGCAGGAGAGCTGCCGCGGCTGGCTCACCACGGTCGCCCGCAACCTCGTCATCGACCGGCTCCGCAAGCGCGGGCGCCGGCCGCAGGAGGCCGGTGACGAGGCGCTGCCGCACGTCGTTGAGCCGACCTGCGGCATCGACCGGGCGCTGGTTTCGATCACACTGCGCGAGGCGATGGCCAAGCTCACGCCGGCCCGCCGACAGATCCTGGTCGAGATGTACTACCGCGAGCGCAGCCTCAACGAGGTCGCCAAGACGCTCGGGATCCCCGTCGGCACCGTGAAGTCCAGGGCCCACTACGCCCTGCGCGCTCTGCGCAATGAACTGGCCGGCGCGGGTGCGCACGCCGAGCGTCTCGCCGCATGA
PROTEIN sequence
Length: 199
MTSTRFCSTPTIQPRLRLAGSGPTTIHERDMEAICRRHGHALHRYVLSLTFGDQHLAEDIVQETFLRAWRSPELVTDGQESCRGWLTTVARNLVIDRLRKRGRRPQEAGDEALPHVVEPTCGIDRALVSITLREAMAKLTPARRQILVEMYYRERSLNEVAKTLGIPVGTVKSRAHYALRALRNELAGAGAHAERLAA*